Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1440 ATGGCCACGCGTAGCTCTCTTCATCTTCTTCAATTCTATCTAAGATTTGTGGGGCTTGGTAAAACATTGCAAACTATATCTTTGGTAGGTTATTTACATGAGTTCAGGGGAATCAAAGGACCTCATATGGTGGTAGCTCCTAAATCTACTCTTAAAAATTGGATGAATGATATTCAGCACTTTTGTCCTATTCTACGTGCAGTAAAGTTTCTTGGCAACCCTGAAGAGAGGAAATATATAAGGGAGGAATTACTAGTAGTTGGGAAGTTCGATGTTTGTGTTACAAGTTTTGAAATGGCAATCAAGTAG 309 0.3786 MATRSSLHLLQFYLRFVGLGKTLQTISLVGYLHEFRGIKGPHMVVAPKSTLKNWMNDIQHFCPILRAVKFLGNPEERKYIREELLVVGKFDVCVTSFEMAIK* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1440 102 Gene3D - 18 102 IPR038718 -
Ahy19g1440 102 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR17 17 102 - -
Ahy19g1440 102 PANTHER SNF2/RAD54 HELICASE FAMILY 17 102 - -
Ahy19g1440 102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 100 IPR027417 -
Ahy19g1440 102 Pfam SNF2-related domain 18 100 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1440 Ahy-Chr19 36613854 36618391 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy19g1440 SNF2_N 6.00E-12 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1440 K11654 - ahf:112775080 209.534