Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1433 ATGAAAATCGAGCTTGATGATCTGAGTCTTCTTGATGCCAACAAGGCCACCGAATTTATAATCGTGCTCCAATTTGCCAAGATGAAGTTCTACAATGGTGTGATGACTATCACCAACACAAACTACACCACAAGGCTCATGGTTAATGCTAACCTTGAAGTGGTTAAGAAATTCTGCCAAAAGCTGATTGGACTTGGTACCAAGCATAGCACCACCATTGATGTTATAGGCTGGGTAGTGAGGTATTCTCCTTCTGAAGATTTTGTCAGCCTTACACCTTATGCACTTATATATCAGATAAAGCAAACTGTTGAGAAATCAACCTACGTGACCTGTGGAACAGTCATTGACATTGACAGAGATCATGCATGGTGGTACAAGGCTTGCAGGCAATGCACTCAGGGACTCGAGGCTCTTACTGACCAATTTTATTGTGCAAAATGCGATGTTTACTCAACAATTTTTGTTGCCAGGTTTTGCATTCAGGTTCGTGTTGTTGATGAGTCAGATACAGCAACTTTTGTTCTCTTTGAGAATTCTGCCTCAAAGTTCTTAGGACTAACTGCCGCTGACATCCGCACCAGCATGCTTGCTAAGGGTTATGGAAGAGACCATTTCCCAGAGCAGCTGAATGCACTGGTTGGGAAGACACTCCTTTTCAAGCTTACTAGGCATGATAGCCTAAATAAATTTCAGGCGTGCGTGATCACTGTTTCTAGGATATGTTCTGATCCAGAAATTATAGCTTCACTTGCTTTAGAAAAGAACATTCAATTGGATGCATTGCAGAAGTTGACCACTGCAACGGGTGTTCGTAGCGGTGAATTGATTTCGAATGGGAGCATAGTCTGA 852 0.4237 MKIELDDLSLLDANKATEFIIVLQFAKMKFYNGVMTITNTNYTTRLMVNANLEVVKKFCQKLIGLGTKHSTTIDVIGWVVRYSPSEDFVSLTPYALIYQIKQTVEKSTYVTCGTVIDIDRDHAWWYKACRQCTQGLEALTDQFYCAKCDVYSTIFVARFCIQVRVVDESDTATFVLFENSASKFLGLTAADIRTSMLAKGYGRDHFPEQLNALVGKTLLFKLTRHDSLNKFQACVITVSRICSDPEIIASLALEKNIQLDALQKLTTATGVRSGELISNGSIV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1433 283 Pfam Replication factor-A C terminal domain 112 223 IPR013955 -
Ahy19g1433 283 Gene3D - 91 250 IPR012340 -
Ahy19g1433 283 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 5 191 - -
Ahy19g1433 283 SUPERFAMILY Nucleic acid-binding proteins 97 229 IPR012340 -
Ahy19g1433 283 CDD RPA1_DBD_C 97 222 IPR013955 -
Ahy19g1433 283 PANTHER REPLICATION FACTOR A 1, RFA1 5 191 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1433 Ahy-Chr19 35909582 35911553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1433 118 223 Core DNA Replication Machinery Family AT5G08020 25.234 1.09e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1433 - - ahf:112778245 563.918