Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1392 ATGGTTTGCCAAGAACAAGAGGCATTAGTGAACAAAGTGCTTGACCTCTACCACAAGATTTCAACCTTAGACACCCTCAAACCTTCCCAAGATGTGGACACCCTCTTCACCCAACTCGTTCGCACATGCATCCCTCATACCCCATTCATCGACATCACTAAACTTTCCACAACCGTCCAAGAAGCTAGATCCGACCTAATTCGTCTTTGCGCCGAAGCCGAATCGCTCTTGGAGATGCATTATTCGGCGCTTTTGGTGTCGTCATCCTCCGGTGAGAACCCACTTGGACGTCTTCACGTCTTTCCCTACTACTCTAACTACCTCAAACTTAGTTGTCTCGAATTCAACATTCTTAGCCAGCACTGCCAGGCTGTTCCCACCAAGATTGCCTTCGTGGGTTCTGGCCCTCTTCCCTTAACCTCCATTGTCTTGGCTACCAACCACTTTCCCAACACCACATTCCATAATTATGACATAGACGCTTTGGCCAATTCTATGGCCAAGGCGTTGGTGTCTTCGGATCATGACCTGTCAAAGCGCATGGTCTTTCACACTAGCGACATATTAGATGTGTCGCATGGTTTGAACGAGTTCAATGTTGTTTTTCTTGCCGCGCTCGTGGGAATGAAAAATGAGGAGAAGAAGAAAGTAATTGACCATCTGGGTAAGTATATGGCACCTGGGGCATTTCTTATGGTAAGAAGTGCCTATAGTGCCAGAGCATTTCTATATCCGGTAGTCAATCCTTCTTTTGATCTCAAAGGATTTGAAGTTTTGTCCGTCTTTCACCCTACTGATGAGGTTATCAATTCTATTGTGATTGCGCAAAAATGTCCGATTATTTCAACATCGTCCAAAGAGGTTGAATCAGTCTTCAGTAATAATAACCTTCTCATCAATGGGAACATGATTGAGGAATTGGTAACTGAGGAGCAGCTTTAA 942 0.449 MVCQEQEALVNKVLDLYHKISTLDTLKPSQDVDTLFTQLVRTCIPHTPFIDITKLSTTVQEARSDLIRLCAEAESLLEMHYSALLVSSSSGENPLGRLHVFPYYSNYLKLSCLEFNILSQHCQAVPTKIAFVGSGPLPLTSIVLATNHFPNTTFHNYDIDALANSMAKALVSSDHDLSKRMVFHTSDILDVSHGLNEFNVVFLAALVGMKNEEKKKVIDHLGKYMAPGAFLMVRSAYSARAFLYPVVNPSFDLKGFEVLSVFHPTDEVINSIVIAQKCPIISTSSKEVESVFSNNNLLINGNMIEELVTEEQL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1392 313 Pfam Nicotianamine synthase protein 4 279 IPR004298 GO:0030410|GO:0030418
Ahy19g1392 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 282 IPR004298 GO:0030410|GO:0030418
Ahy19g1392 313 Gene3D Vaccinia Virus protein VP39 6 279 IPR029063 -
Ahy19g1392 313 PANTHER NICOTIANAMINE SYNTHASE 3 5 312 IPR004298 GO:0030410|GO:0030418
Ahy19g1392 313 PANTHER NICOTIANAMINE SYNTHASE 5 312 - -
Ahy19g1392 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 265 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1392 Ahy-Chr19 32077170 32078567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1392 1 307 Nicotianamine Synthase Gene Family AT5G04950 54.517 9.85e-124 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1392 K05953 - gmx:100803630 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1392 19 32077170 32078567 Ahy19g1392 19 32077170 32078567 ECH