Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1377 ATGGCATCCCTCGAATCAATTATAAACGCTCCGGAACCTTCCACCAATAACCCCGAAACTACCTCACCCGATTCTGATTCCAATCCCAACAAACGCCGCAAAATCGGACACCGCACTGTCGCCGCCGATGCCTCTCTCAATCATCTCCATTGGACATCCCAATCCGAGCAGCAGATCTACTCCATCAACCTCCTCCGCACCCTCCGCCACGTCCTCCGCCGCAACCCTTCCCCCTCCACCACCGCATCAAAGCCCCGCCAGGTCCGCTACGCCGCCGACAGAGTCCTCGCCGCCGCCGCCAAGGGCAGAACGCGCTGGAGCCGGGCCATCCTCTCATCTCCGCCGCCCTTCAATAACCGCCGGATGCTCCACAAGAAGGCCCCCGCCGCCAGGAAGAAGGTCACCGGATTGAGAAGTATGCGTAACGGAACGGAAAAGAAGAAGTTACCGGCCGTTCAGAGAAAAGCGCGCGTTCTTAGCCGGTTGGTTCCCGGTTGCCGGAAGCTCTCTTTCCCTAACCTTCTAGAAGAAGCCACTGATTATATCTCCGCCTTGGAGATGCAAGTGCGCGCCATGACCGCTCTCGCCGAGTTACTCGCTGGTGGTGGCTCGCCGAGTGGACTCGCCGGTGAATCGTTAAGTTGA 645 0.5891 MASLESIINAPEPSTNNPETTSPDSDSNPNKRRKIGHRTVAADASLNHLHWTSQSEQQIYSINLLRTLRHVLRRNPSPSTTASKPRQVRYAADRVLAAAAKGRTRWSRAILSSPPPFNNRRMLHKKAPAARKKVTGLRSMRNGTEKKKLPAVQRKARVLSRLVPGCRKLSFPNLLEEATDYISALEMQVRAMTALAELLAGGGSPSGLAGESLS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1377 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Ahy19g1377 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 201 IPR036638 GO:0046983
Ahy19g1377 214 CDD bHLH_AtIBH1_like 145 196 IPR044549 GO:0006355
Ahy19g1377 214 MobiDBLite consensus disorder prediction 1 25 - -
Ahy19g1377 214 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 202 IPR044660 GO:0006355
Ahy19g1377 214 PANTHER TRANSCRIPTION FACTOR BHLH149 21 202 - -
Ahy19g1377 214 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1377 Ahy-Chr19 30747191 30748266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1377 50 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.000 1.03e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1377 - - adu:107465172 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1377 19 30747191 30748266 Ahy9g1100 9 24433759 24434798 hybridization
Ahy16g0880 16 15743906 15744858 Ahy19g1377 19 30747191 30748266 PCT
Ahy6g0480 6 5882333 5883275 Ahy19g1377 19 30747191 30748266 PCT
Ahy19g1377 19 30747191 30748266 Ahy16g0880 16 15743906 15744858 PCT
Ahy19g1377 19 30747191 30748266 Ahy6g0480 6 5882333 5883275 PCT