Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1363 ATGGCTCCCAAATCCAAATCCAAATCCAAAGCCAAAGCCAAAACCCCAAAACCCTCTCCTTCCTCCTCCTCCAAGTCCTCCTCCTCATCCTCCATCTTCAAACCTGGCACGAGAGTCGAGGTCAGCTCCGATGACGACGGATTCCGTGGTTCTTGGTTCTCCGGCACCGTCATCCGCCGCGCTGGTGCGGACAAATTCACGGTCGAGTACGACAACCTCTTGGCCGACGAGCGGGGCAAAAAGAAGCTGAGGGAGCAGCTCGGCTTCCACCAGCTTCGGCCGCTTCCTCCGGAGGAGGCCGGCGTCGAATTCAAGTTCGGCGATGAGGTTGACGCGTTCCACAACGACGGTTGGTGGGAGGGGAGTATCACGCAGGAGCTGGAGAATGGTATGTTCGCTGTTTATTTCAGAGGGTCGAAGGAGCAGATCGAGTTTACCGCGGACCAGCTGAGGAAACATCGCGAGTGGATGAATGAGAAGTGGGTTCCGCCGTTTGCGCAGCAAGAACAAGAAGAGAATATGGTGTCAGACCCAAATGCAAAGTCTGATAAAACTGTGAAAGGGAAAGAAGTGGTGGCGACACCAAATGTGACGTCTGATGATAAAGATGTGAAAGGGAAGGGAGTGATGTTGACACCAAATGTGTCATCTGATGATGAAGGGAAGAAAGTGGTGTTGACACCAAATATAAAGTCTGATGAAACTGCAGAAGAGTTCAATTTTTGTGAAGGGATGCTGGTTGAGGTAAGCAATGATGAGGAAGGTTTCCAAGGAGCTTGGTTTTCTGCCACTGTTGTTGAAGTAATTGGAGACGATAGGTTCCTTATAGAGTACAAGACCCTGCTGGACGATAATTCGAATCTTTTGAGAGAGGAGGCTGATAAGTGGCACATAAGGCCCCCTCCCCCAGCAACTTCTGAGAACATTAAATTCAGTTATCTTGAAGAAGTGGATGCTATGTACAACGATGGATGGTGGGTTGGTGTAATTTCCAAAGTTCTTGGCGACTCAAAGTACGTAGTTTACTTCAGGAGCTCCAATGAAGAAATAGAGTTTCCGAACTCCCAGTTGAGGCCACATCTGGACTGGATTGGCGGCAAGTGGGTCTTGGCTTCTGAGGCGTTGAACTTGTTGTGA 1137 0.4978 MAPKSKSKSKAKAKTPKPSPSSSSKSSSSSSIFKPGTRVEVSSDDDGFRGSWFSGTVIRRAGADKFTVEYDNLLADERGKKKLREQLGFHQLRPLPPEEAGVEFKFGDEVDAFHNDGWWEGSITQELENGMFAVYFRGSKEQIEFTADQLRKHREWMNEKWVPPFAQQEQEENMVSDPNAKSDKTVKGKEVVATPNVTSDDKDVKGKGVMLTPNVSSDDEGKKVVLTPNIKSDETAEEFNFCEGMLVEVSNDEEGFQGAWFSATVVEVIGDDRFLIEYKTLLDDNSNLLREEADKWHIRPPPPATSENIKFSYLEEVDAMYNDGWWVGVISKVLGDSKYVVYFRSSNEEIEFPNSQLRPHLDWIGGKWVLASEALNLL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1363 378 SMART agenet_At_2 309 365 IPR014002 -
Ahy19g1363 378 SMART agenet_At_2 31 100 IPR014002 -
Ahy19g1363 378 SMART agenet_At_2 239 306 IPR014002 -
Ahy19g1363 378 SMART agenet_At_2 102 158 IPR014002 -
Ahy19g1363 378 Gene3D - 25 79 - -
Ahy19g1363 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 14 373 - -
Ahy19g1363 378 MobiDBLite consensus disorder prediction 197 220 - -
Ahy19g1363 378 MobiDBLite consensus disorder prediction 14 37 - -
Ahy19g1363 378 MobiDBLite consensus disorder prediction 1 48 - -
Ahy19g1363 378 Pfam Agenet domain 244 303 IPR008395 -
Ahy19g1363 378 Pfam Agenet domain 317 360 IPR008395 -
Ahy19g1363 378 Pfam Agenet domain 36 97 IPR008395 -
Ahy19g1363 378 Gene3D - 227 311 - -
Ahy19g1363 378 MobiDBLite consensus disorder prediction 168 187 - -
Ahy19g1363 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 14 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1363 Ahy-Chr19 29853260 29856376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1363 253 363 PHD Transcription Factor Family AT5G58610 28.788 5.84e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1363 - - lja:Lj5g3v1529970.1 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1363 19 29853260 29856376 Ahy19g1363 19 29853260 29856376 ECH
Ahy19g1363 19 29853260 29856376 Ahy9g1085 9 23259911 23262996 hybridization