Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1348 ATGGGTTCTGATCTGAAAGTTGAATTGTCCAAGAAAACTCCAATTTTTGGTATTAAGGTTTGGGAAGTAATTGGAATTGCGGTTGGATTATTCATTATAGTGATCCTTTGTGTGCTCTCATTTTGCCTTAGTTCAAGGAAGAAGTCTAAAAAGGATAGAGATAACAAGGTTCCTGTTAGTCAAATACCCACCGTGTCGAAGGAAATCAAGGAGGTGAGGGTTGAGCAAGTGCCGGCGAATGGATTCGTCCCGCGAGATGGAATACTCCTCACTATTCATGATAAGTCCAGTGACAGAGAATCAGACAAAGTTATGGTTCACTTGGGTGTGGGGAAAATGAAGCATGGGGATAGTGGCAGCCACTCAGATTCATTTCATCACTTGGAGAAAGATGGATATGGATCACAGTCAGGGGAAGAAGGCAGCTCCGGCACGTTTAAAGCAGCATACAATCCGTCTTCTTCGTATCCTATTACAGCCCCTTCGCCTCTGTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACTTGCCACAAACCGGTTTTCGAAGGAGAATGTCCTTGGTGAAGGTGGCTATGGAGTTGTTTATAGGGGACAGTTGATAAATGGGACTTCAGTGGCAGTTAAGAGGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGGGTTGAAGTTGAAGCTATTGGCCATGTTCGACATAAAAATTTAGTTCGTCTTTTGGGGTATTGCATTGAGGGGACTCACAGGATATTAGTGTACGAGTATGTTAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGTCATCATGGATATCTTACCTGGGAAGCGCGTATCAAGATTCTTCTGGGCACGGCTAAAGCGCTTGCTTATTTGCATGAAGCAATTGAACCGAAGGTTGTACACCGAGATATCAAGTCGAGCAACATATTAATTGATGACGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTGCTGGGAAGAGTCATGTTACAACAAGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTAAATGAGAAGAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTCGAAGCAATTACCGGAAGAGATCCAGTCGACTATGGCCGTCCACCACAGGAAGTTAATCTGGTTGACTGGTTGAAGATGATGGTTGGAAACAGACGATCGGAAGAAGTAGTAGACCCGAACATTGAGGTGAAGCCATCAACCAGAGCTTTGAAACGGGCTCTCTTAACAGCTTTAAGATGTGTTGATCCAGATCATGTCAAAAGACCCAAGATGGGCCAAGTCGTACGAATGCTCGAGTCAGAGGAATACCCTTTACCCAGAGAGGATCGAAGGCAGCGAAGAAATTGTGGAAATAACTCGGAAATCGAATCCCAGAAGGATCATTCGGACACAGACAGGAGCGAGATTCAGGGTTCTGTATCAGAGAGTGGAGGGTAA 1530 0.4431 MGSDLKVELSKKTPIFGIKVWEVIGIAVGLFIIVILCVLSFCLSSRKKSKKDRDNKVPVSQIPTVSKEIKEVRVEQVPANGFVPRDGILLTIHDKSSDRESDKVMVHLGVGKMKHGDSGSHSDSFHHLEKDGYGSQSGEEGSSGTFKAAYNPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLINGTSVAVKRILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPPQEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDHVKRPKMGQVVRMLESEEYPLPREDRRQRRNCGNNSEIESQKDHSDTDRSEIQGSVSESGG* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1348 509 MobiDBLite consensus disorder prediction 466 509 - -
Ahy19g1348 509 MobiDBLite consensus disorder prediction 466 499 - -
Ahy19g1348 509 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 503 - -
Ahy19g1348 509 Gene3D Transferase(Phosphotransferase) domain 1 267 478 - -
Ahy19g1348 509 PANTHER OS01G0323000 PROTEIN 3 503 - -
Ahy19g1348 509 MobiDBLite consensus disorder prediction 114 134 - -
Ahy19g1348 509 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Ahy19g1348 509 ProSiteProfiles Protein kinase domain profile. 191 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g1348 509 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Ahy19g1348 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Ahy19g1348 509 CDD STKc_IRAK 197 463 - -
Ahy19g1348 509 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g1348 509 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g1348 509 MobiDBLite consensus disorder prediction 114 146 - -
Ahy19g1348 509 SUPERFAMILY Protein kinase-like (PK-like) 175 471 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1348 Ahy-Chr19 28332032 28336482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1348 17 465 Trihelix Transcription Factor Family AT1G70460 40.308 4.97e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Ahy19g1348 Pkinase 5.20E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1348 - - gmx:100787014 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0858 16 15351908 15356682 Ahy19g1348 19 28332032 28336482 ECH
Ahy19g1348 19 28332032 28336482 Ahy19g1348 19 28332032 28336482 ECH
Ahy19g1348 19 28332032 28336482 Ahy9g1062 9 21989347 21994054 hybridization
Ahy19g1348 19 28332032 28336482 Ahy16g0858 16 15351908 15356682 PCT
Ahy19g1348 19 28332032 28336482 Ahy6g0498 6 6031054 6035791 PCT