Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1316 ATGCCACAGTTGGGACTTGAAGTTTTAATAATGAAGGTCCTCCTTGTGTGGCTTGGCATTGTTGTTGTTGTTGTTGTTGTGTCAAGCAAGGCGTCTGAAGCGGTTGAGCATCATTACGTGAATGCAAGTGATCTCAACTTGTTGGAGGCACATGAAGCTGGAAGGGGTGCATACACTCTTATGGTAGGACTCACCCTTATTCAAACTGCTGCTGCTCAAGGAGCAGTTTGTTTGGATGGATCATTGCCTGGTTACCATTTACATCGAGGATATGGATCAGGAGCAAATAGTTGGATCGTTAATTTAGAGGGAGGAGGATGGTGTAATGATGTCAGGACATGCATTTATCGCAAGAAAACTCGGCGCGGATCTTCAGCATTCATGGAAAAGGAGATACCTTTTACAGGAATATTAAGCAATAAGGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGAGTGAAGATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGACAGTGAACATAAGGCTGCACGTCTGCAATTCCGAGGACAGCGCATTTGGATGGCTGCAATGGAGGATCTGATGTCGAAGGGAATGCGTTTTGCCCGGCAGGCTCTACTTTCTGGATGCTCAGCTGGTGGCCTGGCTACCATCATACACTGCGACGAATTTCGAGGTCTGTTTCCAAGGAGTACAAAAGTGAAGTGTCTCAGTGATGCTGGGCTATTTCTTGATGCGACCGACGTATCTGGTGGACACACACTCAGGGATTTTTTCAGTGGTGTTGTAGGGTTGCAGGGAGTGCAGAAGAATCTGCCGCGTACTTGTACCAATCACCTTGATCCCACATCGTGCTTCTTCCCACAGAACTTGATTGCCGGTATAAGAACCCCACTCTTCATTCTCAACACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCGACAACAGCGGACCCAGGTGGCAATTGGCATGATTGTAGAAAAAATTATTATAGGTGTTCTGGTTCACAGATCCAGTTTCTACAAGGTTTCAGGAATGAAATGTTGAATTCTATGAAAGGCTTCTCAAGATCAAATCAGAATGGAATGTTTATCAATTCATGTTTTGCTCACTGTCAATCTGAGAGGCAGGATACATGGTTTGCGGATAATTCTCCTGTCATTAGGGAAAAGGCAATTGCTCTGGCAGTTGGAGACTGGTTTTTCAACCGTGCTGTCGTTAAGGACATCGATTGTGCTTACCCTTGTGATAATACATGCCACAATCTGATCTTCAGATGA 1278 0.4499 MPQLGLEVLIMKVLLVWLGIVVVVVVVSSKASEAVEHHYVNASDLNLLEAHEAGRGAYTLMVGLTLIQTAAAQGAVCLDGSLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRTCIYRKKTRRGSSAFMEKEIPFTGILSNKAEQNPDFFNWNRVKIRYCDGASFAGDSEHKAARLQFRGQRIWMAAMEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGLFPRSTKVKCLSDAGLFLDATDVSGGHTLRDFFSGVVGLQGVQKNLPRTCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPTTADPGGNWHDCRKNYYRCSGSQIQFLQGFRNEMLNSMKGFSRSNQNGMFINSCFAHCQSERQDTWFADNSPVIREKAIALAVGDWFFNRAVVKDIDCAYPCDNTCHNLIFR* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1316 425 Pfam Pectinacetylesterase 60 404 IPR004963 GO:0016787
Ahy19g1316 425 PANTHER NOTUM-RELATED 59 424 IPR004963 GO:0016787
Ahy19g1316 425 PANTHER PECTIN ACETYLESTERASE 2 59 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1316 Ahy-Chr19 27090740 27095461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1316 61 425 Carbohydrate Esterase AT1G57590 73.699 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1316 K19882 - gmx:100810716 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1316 19 27090740 27095461 Ahy9g1045 9 21080573 21084953 hybridization
Ahy16g0837 16 14970929 14974724 Ahy19g1316 19 27090740 27095461 PCT
Ahy6g0515 6 6276287 6279968 Ahy19g1316 19 27090740 27095461 PCT
Ahy19g1316 19 27090740 27095461 Ahy16g0837 16 14970929 14974724 PCT
Ahy19g1316 19 27090740 27095461 Ahy6g0515 6 6276287 6279968 PCT