Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1297 ATGGATGAGAAAGTTAAGAAGTCAAAGACTGAAGAAATCTGTTTGGAGCCAAATGACAGGAAGAAGGATAAGCACATGAAGAAAAAGAAAAAACACCGAAATGATAAAGCACTCGATTCAGATAAAATTCTTGAGGGAAATTGTATTGATGATGATGGTGAGAGACAGGCTTGTTCCAATGATAAATTTACGAGGAATAAAGAAGAGGATGGGAACATTAGTAAGAAGTTGAAGAAAAAAAGGATAAAGGACACTGAAGTGTTACATAATGCGATTGTTGATGATAAAATATTGCAGGTAATGGATGACAACCAAAAAAGCAAGAGGAAGAAGAGAAAAATTTGCAGTGATTCATTAACTGCAATCCAAGAAATAGGTTCTTCAAAACCAAAGAAAAGAGGGAAAGTTGTTGGGAATTACGACTTCAAGGACCATGAGGGTGATCCTCCTTTGGCCAGAATCAGCACTGGAGATGCTAATGCACATTCACTTGTCAATGAAGTTGATGATCAAGGTGAGAAGACGGAGAAGAATAAGAAGGAACTGAGAGAAAAGGGTGATTATTTTGTCGTTCCTAGTGACCGGCAAGACAAAGAGACAGAGAAGGTAATTATTAATAAAGTGAAAAGGATTGAAGAAGATGACTGCAAAACCAATAAAGGTGATACTTGTTTTGCTGAAAGTATTGTAGCTGATACTTCTTTGGTCAAAAGTAATGAAGGTGAAGATCATCAAGGCAAGAAGATGAAGAAGAAGAAGAAACTGAGAAATAAAAGCAAAAGTAAGTTTGAAAGCACTGAAGATGATCAACATTGTGCTGAAGCCAATGAAGGTGAAGACAATAACCAAGGCAGGCAAAGGAAGAAGAAATTGAGCAATAAACGAAAAAGTAAGGATAAAAGTGAGTTTAAAAGCAGCAAAGATGATCAACATTGTGCCAACGGCAATGAAGGTGATGATGATAACCTGGGCAAGAAGATGAAGAATGGTAAACAGAGTGAAGAAAGCAAAAGTAATGAGAGAAATGAAGTTAATGATCAAGGAAGGAAGACGAAGATAAACAAGAAAACTAAGGAAGGCACCACATCCAAACTCAAACGAGTAACATTTTCTGATCAGGTGGAGGTCTGTGGTGATGGCTTAATACGGTGGCAAAGGTATACGAATGAAGAAGATGAAAAAATTAAACAGGCTGTTTTCGACTATATAGAGACTCACAAATTGGGGGATGAAGGTCTTGATATGGTTCTTAATTCTAGATATCACCCTGAAGTTAAACATTGTTGGAAGGAAATTGGAGTAGCCTTGCCCCATAGGCCTTACATTAGTGTATATAATCGTGCACGCATTTTGTTTGCTAGGAAAGGCACCACATCCAAACGCAAACGAGTAACATTTTCTGATCAGGTGGAGGTCTGTGGTGATGGCTTAATACGGGGGCAAAGGTATACGAATGAAGAAGATGAAAAAATTAAACAGGCTGTTTTCGACTATATAGAGACTCACAAATTGGGGGATGAAGGTCTTGATATGGTTCTTTATAATAAACATCACCCTGAACTTAAAAATTGTTGGAAGGAAATTGGAGTAGCCTTGCCCCATAGGCCTTACATTAGTGTATATTATCGTGCTCACATTTTGTTTACAAGGGATGAGAAACACACTTGGACAGCTGAAGAGGTCGAGTTTTTAAAGAAGACAGTCGAACGACATGGATCTGATTTTAAATCAATAGCCGAGGCAATGGGTAAAAATCGACTTCATGTAAAGGATCAATGGCGTAGAATAAAAATGACCAGAAAGAGAGGAGCATGGTCTCAGGAGGAGTATCAAAAAGTATTTGATTTGGTAAGCGTTGACCTACGTGCAAGGGCTTTAGAAGACACTAGGAATAAAAAGCATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTAGTGACAAATTGGGAACTAGATGGAATGGAGGAATTTGCCAAAAGTGGTATTCTCAACTAACATCTCCTATGGTTGATAAAGGTATTTGGAGTGATACTGATGACTACCGCTTGGTAGATGCCTTATTTAGCTTGGATGCTTGCAGCATGGAGGAGGTAGACTGGGACAATTTGCTTGAGCACAGGGATGGTGAGTTATGCAGAAAACGATGGAATCAAATGGTTCGATATATTGGAGAGCATGGGAGAAAGTCATTCACTGAGCAGGTGGAAATTCTTGCCAAAAGATATTGCCCTGATTTATTGGAAGCAAGAGAAGCCTTTGATAGCCAACCTGTCATTTGTGGACGATCTTGCGAAAAGATATTGCCCTGA 2313 0.3869 MDEKVKKSKTEEICLEPNDRKKDKHMKKKKKHRNDKALDSDKILEGNCIDDDGERQACSNDKFTRNKEEDGNISKKLKKKRIKDTEVLHNAIVDDKILQVMDDNQKSKRKKRKICSDSLTAIQEIGSSKPKKRGKVVGNYDFKDHEGDPPLARISTGDANAHSLVNEVDDQGEKTEKNKKELREKGDYFVVPSDRQDKETEKVIINKVKRIEEDDCKTNKGDTCFAESIVADTSLVKSNEGEDHQGKKMKKKKKLRNKSKSKFESTEDDQHCAEANEGEDNNQGRQRKKKLSNKRKSKDKSEFKSSKDDQHCANGNEGDDDNLGKKMKNGKQSEESKSNERNEVNDQGRKTKINKKTKEGTTSKLKRVTFSDQVEVCGDGLIRWQRYTNEEDEKIKQAVFDYIETHKLGDEGLDMVLNSRYHPEVKHCWKEIGVALPHRPYISVYNRARILFARKGTTSKRKRVTFSDQVEVCGDGLIRGQRYTNEEDEKIKQAVFDYIETHKLGDEGLDMVLYNKHHPELKNCWKEIGVALPHRPYISVYYRAHILFTRDEKHTWTAEEVEFLKKTVERHGSDFKSIAEAMGKNRLHVKDQWRRIKMTRKRGAWSQEEYQKVFDLVSVDLRARALEDTRNKKHGMLRDNIGWEAISDKLGTRWNGGICQKWYSQLTSPMVDKGIWSDTDDYRLVDALFSLDACSMEEVDWDNLLEHRDGELCRKRWNQMVRYIGEHGRKSFTEQVEILAKRYCPDLLEAREAFDSQPVICGRSCEKILP* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1297 770 Pfam Myb-like DNA-binding domain 556 613 - -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 127 150 - -
Ahy19g1297 770 ProSiteProfiles Myb-like domain profile. 597 666 IPR001005 -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 1 70 - -
Ahy19g1297 770 SMART sant 601 669 IPR001005 -
Ahy19g1297 770 SMART sant 552 599 IPR001005 -
Ahy19g1297 770 SMART sant 672 723 IPR001005 -
Ahy19g1297 770 SMART sant 479 550 IPR001005 -
Ahy19g1297 770 SMART sant 383 454 IPR001005 -
Ahy19g1297 770 CDD SANT 555 597 IPR001005 -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 260 287 - -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 128 150 - -
Ahy19g1297 770 ProSiteProfiles Myb-like domain profile. 668 721 IPR001005 -
Ahy19g1297 770 Gene3D - 557 596 - -
Ahy19g1297 770 SUPERFAMILY Homeodomain-like 553 609 IPR009057 -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 167 186 - -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 235 359 - -
Ahy19g1297 770 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 553 601 IPR017930 -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 1 22 - -
Ahy19g1297 770 PANTHER GB|AAC33480.1 20 456 - -
Ahy19g1297 770 PANTHER GB|AAC33480.1 459 760 - -
Ahy19g1297 770 Coils Coil 165 185 - -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 296 359 - -
Ahy19g1297 770 MobiDBLite consensus disorder prediction 34 70 - -
Ahy19g1297 770 Gene3D - 597 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1297 Ahy-Chr19 26181102 26186044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1297 525 720 MYB-Related Transcription Factor Family AT3G18100 24.138 3.30e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy19g1297 Myb_DNA-bind_6 1.30E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1297 - - ahf:112779696 1519.6