Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1293 ATGGCATCTTCATTCTCAACTCAATTGCTGCAAAGTCAAATTCTACTTCCCCGTTTTCATCATCTCCAGGGGAAACTTAGCCAAGATGTGTCGATGGTTCGGAAGCCGCAGGTTGTCTGTAGCAGTATCGGATCACGGATTGGTTACAACCAAACACTGGCTTCAAGATCACACTATGCTGTGAGGTTTTCTGTCACACAACAATCTGAAGCAAAATCAATGAGATATAGGAGAATGACATGCATGAACGTCACTGAAAGTGAGCTGCTAGCCAAAGTGACAACTAAGTGCTTCTTCGATGTACAAATTGCGGGTGAACCTGCTGGCAGGATTGTTTTTGGTTTGTTTGGGGACGTCGTTCCTAAAACAGCTGAGAATTTTCGAGCTTTGTGCACAGGAGAGAAAGGATATGGCTATAAAGGATCCTACTTCCATCGTATAATCAAAGACTTCATGATTCAAGGCGGGGACTTCACCGAGGGAAATGGAACCGGTGGAGTTAGTATCTATGGTTCTCGTTTTGAAGATGAGAATTTTAACTTGAAGCATGCTGGTCCTGGAATTTTGAGTATGGCAAATGCTGGTCCTGATACCAATGGCAGTCAGTTTTTTATTTGCACCGTACCGACACCATGGCTAGACAATCGCCATGTCGTGTTCGGACAAGTCATTGATGGAATGGATGTTGTGAAGACTCTCGAGTCACTGGAGACGAGCCAGCGTGATAACAGCCCCAAGAAAGCAAGCAAAATCGCTAATTGCGGTGAACTGCCTCTTGATGGTTGA 786 0.4478 MASSFSTQLLQSQILLPRFHHLQGKLSQDVSMVRKPQVVCSSIGSRIGYNQTLASRSHYAVRFSVTQQSEAKSMRYRRMTCMNVTESELLAKVTTKCFFDVQIAGEPAGRIVFGLFGDVVPKTAENFRALCTGEKGYGYKGSYFHRIIKDFMIQGGDFTEGNGTGGVSIYGSRFEDENFNLKHAGPGILSMANAGPDTNGSQFFICTVPTPWLDNRHVVFGQVIDGMDVVKTLESLETSQRDNSPKKASKIANCGELPLDG* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1293 261 SUPERFAMILY Cyclophilin-like 88 257 IPR029000 -
Ahy19g1293 261 CDD cyclophilin_ABH_like 96 255 - -
Ahy19g1293 261 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 98 256 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 52 260 - -
Ahy19g1293 261 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 139 156 IPR020892 GO:0003755|GO:0006457
Ahy19g1293 261 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 52 260 - -
Ahy19g1293 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 230 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 156 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 202 214 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 130 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 100 255 IPR002130 GO:0000413|GO:0003755
Ahy19g1293 261 Gene3D - 84 260 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1293 Ahy-Chr19 26083929 26087857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1293 109 242 U-box Gene Family AT5G67530 46.667 1.08e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1293 K03768 - gmx:100526955 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1293 19 26083929 26087857 Ahy19g1293 19 26083929 26087857 ECH