Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1285 ATGGCAATGAAGAAGAAGAAGCTGAATTTTTTTGGATTTGCATTTGCATTTGCATGCTTAGTTTGTGGTGTTGTCTCCTATGGATCTGAGCCACTCTCTGTGCTTTCTTTCTTGGAAAACGATGCCGTTTGGGCCAAGCCTTCTTCATTAACAACATACCAACCTCTCATGGTTAATCTCACTCTCATTCATGGAGCTGCTTCTACAGGAGCTGTTTGTTTGGATGGAACATTGCCGGGTTACCACTTGGATCGCGGATTCGGATCTGGTGCGAATAGTTGGCTTGTTCACTTGGAGGGAGGAGGGTGGTGTAATACTGTTAGAAACTGCGTCTACAGAAAAAATACTCGCCGTGGTTCCTCGACATACATGGAAAGTCAAATACAATTCACCGGAATCTTGAGCAATAAGGCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGTGATAATGAACTTGAGTCTGAGCAGCTTCAATTCCGAGGACAAAAAATATGGCTAGCAGCAATTGAGGAATTGATGTTCCAAGGAATGCAGACAGCGAACCAGGCACTTCTGTCCGGATGCTCGGCTGGCGGTCTGGCATCTCTAATACATTGCGATGAGTTCCGAAGCTTGTTTCCAGAATCTACCAAGGTTAAATGTTTGAGCGATGCAGGGTTTTTCCTTGATGCAGTTGATGTCTCTGGGAACCGCACACTGAAGAATCTGTTTGAAGGTGTAGTTCAGTTACAGGATGTACAAAAGAACCTGCCCAAAAGTTGCCTTGACCAATTGGATCCAACTTCGTGCTTCTTTCCTCAGAATATGGTCCAACATATTGAGACTCCATTGTTTCTACTCAATGCAGCGTATGATTCGTGGCAGGTCCAAGCCAGTTTAGCCCCACATTCAGCTGACCCGAATGGCTTTTGGAGCGATTGCAAAGCAAACCATGCGAATTGTACCTCGTCTCAGATTCAGTTCCTCCAAGACTTCAGAGATCAATTGCTAAACGACTTGAAAGACTTCGCAAACACACCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGAGACATGGTTTGCTGATAACTCTCCCCTACTTGACAACAAGCCAATTGCAGTTGCTGTCGGAGACTGGTATTTCGACCGAGAAGTAGTTAAAGCCATTGACTGTGCTTATCCCTGTGACAATACTTGCCACAATCTGGTGTTTAAGTGA 1266 0.4423 MAMKKKKLNFFGFAFAFACLVCGVVSYGSEPLSVLSFLENDAVWAKPSSLTTYQPLMVNLTLIHGAASTGAVCLDGTLPGYHLDRGFGSGANSWLVHLEGGGWCNTVRNCVYRKNTRRGSSTYMESQIQFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDNELESEQLQFRGQKIWLAAIEELMFQGMQTANQALLSGCSAGGLASLIHCDEFRSLFPESTKVKCLSDAGFFLDAVDVSGNRTLKNLFEGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMVQHIETPLFLLNAAYDSWQVQASLAPHSADPNGFWSDCKANHANCTSSQIQFLQDFRDQLLNDLKDFANTPQTGLFINSCFAHCQSERQETWFADNSPLLDNKPIAVAVGDWYFDREVVKAIDCAYPCDNTCHNLVFK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1285 421 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Ahy19g1285 421 PANTHER NOTUM-RELATED 16 420 IPR004963 GO:0016787
Ahy19g1285 421 Pfam Pectinacetylesterase 54 401 IPR004963 GO:0016787
Ahy19g1285 421 PANTHER PECTIN ACETYLESTERASE 16 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1285 Ahy-Chr19 25884000 25888282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1285 57 421 Carbohydrate Esterase AT1G57590 69.589 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1285 K19882 - gmx:100786972 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0807 16 14417966 14422556 Ahy19g1285 19 25884000 25888282 ECH
Ahy16g0837 16 14970929 14974724 Ahy19g1285 19 25884000 25888282 ECH
Ahy19g1285 19 25884000 25888282 Ahy16g0807 16 14417966 14422556 ECH
Ahy19g1285 19 25884000 25888282 Ahy19g1285 19 25884000 25888282 ECH
Ahy11g2173 11 134324851 134329163 Ahy19g1285 19 25884000 25888282 ECH
Ahy19g1285 19 25884000 25888282 Ahy9g1013 9 20117976 20121967 hybridization
Ahy16g0807 16 14417966 14422556 Ahy19g1285 19 25884000 25888282 PCT
Ahy6g0537 6 6573313 6577632 Ahy19g1285 19 25884000 25888282 PCT
Ahy19g1285 19 25884000 25888282 Ahy16g0807 16 14417966 14422556 PCT
Ahy19g1285 19 25884000 25888282 Ahy6g0537 6 6573313 6577632 PCT