Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1269 ATGGATGAAGAAGCCTATTCCTCTTCCTCTTCCTCTTCACCTGTCAACCCTTCTTTCTCAATTGCTTCTTCAAAAAGTGACAAATTCTATGTGAAAGTGTACATGGAAGGCAATCCAATTGGCAGAAAACTCAATCTTTTAGCTCATGATAGCTACCGAGGATTGGTTAAGGCTCTTGAACATATGTTTAAAACTACCATACTCTTGGCAACTGAGTTAGATGCAGTACAAGCAGAGAGGTGCCATGTGCTAACTTATGAGGATGGAGAACGGGATTTGATTATGGTTAGAAATGTGTCTTGGGAGATGTTCTTATCAGCTGTAAAGAAGTTGAAGATCACCAGGCTTGACACATTTATGAAGAGAAGATGA 372 0.3978 MDEEAYSSSSSSSPVNPSFSIASSKSDKFYVKVYMEGNPIGRKLNLLAHDSYRGLVKALEHMFKTTILLATELDAVQAERCHVLTYEDGERDLIMVRNVSWEMFLSAVKKLKITRLDTFMKRR* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1269 123 Pfam AUX/IAA family 22 115 IPR033389 -
Ahy19g1269 123 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 119 IPR003311 GO:0005634|GO:0006355
Ahy19g1269 123 MobiDBLite consensus disorder prediction 1 21 - -
Ahy19g1269 123 Gene3D - 22 122 - -
Ahy19g1269 123 SUPERFAMILY CAD & PB1 domains 21 114 - -
Ahy19g1269 123 PANTHER AUXIN-INDUCED PROTEIN 8 119 - -
Ahy19g1269 123 ProSiteProfiles PB1 domain profile. 28 118 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1269 Ahy-Chr19 25300921 25328744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1269 22 113 B3 DNA Binding Superfamily AT1G59750 30.435 1.86e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Ahy19g1269 AUX_IAA 7.60E-23 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1269 K14484 - gmx:100781660 144.436