Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1250 ATGGAGCAACTTCTTGAGAAGATAATGTCTGTGCAGTCAAGGAGTGACAGCGTTAACACTTCTCTTTTTGACAAAAGGGAGCACATAGAGAAGCTGCATCGTACTTGCAATCTTCTCCGTAAAGTTCAGGTCCCTCCGGTGGGGTTATTTTCCAACTGTCTTGTGCAACAAAAAGTTCTTCATCCATTCCGGAAGCAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCTATTCTCTCTGATCGTTTGAGGATACAAGAACTGAAATTGGAACCTTCCTGA 363 0.4408 MEQLLEKIMSVQSRSDSVNTSLFDKREHIEKLHRTCNLLRKVQVPPVGLFSNCLVQQKVLHPFRKQKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRIQELKLEPS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1250 120 Pfam S25 ribosomal protein 64 113 IPR004977 -
Ahy19g1250 120 Gene3D - 63 114 - -
Ahy19g1250 120 PANTHER BNAA04G12260D PROTEIN 64 113 - -
Ahy19g1250 120 PANTHER 40S RIBOSOMAL PROTEIN S25 64 113 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1250 Ahy-Chr19 24643932 24647881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1250 74 112 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 92.308 3.42e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1250 K02975 - aip:107618240 194.897