Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1249 ATGGCAAACGGCAAAGTCATTGTCGCTGGAGTATCTATCATTCTTGTTGTTGGTGTTGTCATTGGCACCGTTGCCGTTGTTAGCAACAACACCAGCAACGACCAATTGAAAACCCACAATAAGGCAGTTGACTCATTGTGCCAAAACGCAGATGACAAGAAACTTTGTTATGATATCATTGGCAATGTCAATACCACAGACCCAAAGGATTACGTCTCAGAAGTGGTAAGGAAAACCTTGGACAGTGTGATAAAGGCATTCAACATGACTGATACCCTCTCCGTAGAGCACGGTCAGAGTAATCCAGGCATGAAGATGGCCCTTGAAGATTGCAAGGACTTGTTGCAATCGGCAATGCACGAACTGGAGGCCTCTATCAACCTTGTCTCTGAGAACAACTTTGCAAGTGTTTACCAGAGTTCTGCAGAACTCAAAAACTGGTTGGGTGCCGTCATTGCCTACCAACAATCTTGCATGGACGGCTTTGACACCGAAGGTGAAAAGAAGGTCCAAACCGAGTTGCAATCTGACAGCTTGGACAGTGTTGGCAAACTCACTGGTCTTGCTCTTGATGTTGTTTCCGGATTGTCCCACTTCCTTAATGGTCTTGGTTTGAACTTGAACCTCAAACCCGCTTCTAGGAAGCTCCTTGAGGTGGATCATGAGGGATTCCCCACTTGGTTATCCGCCGCAGATCGCAAACTCTTGGCTAACATGGATAATGTCAAACCTAATGTTGTTGTTGCCAAGGATGGTAGTGGCCAATTTAAGACCGTCTTGGACGCAATTAACTCCTACCCCGCCAACTTCCAAGGTAGATACATTATCTATGTTAAGGCTGGCGTTTATGACGAATACATTACCGTTGACAAGAAGTGCAAGAACTTGTTTATCTATGGTGATGGAAATACAAGAACCATTATCACTGGTCGCAAGAACTTCCATGAGGGTACCAAGACAATGAGAACCGCCACATTCTCTTCCAATGCCGATGATTTCATTGCCAAGTCAATTGCATTCGAGAACACCGCTGGCGCTGAAGGTCACCAAGCAGTGGCACTTCGCGTGCAGGGAGATCGCTCAGCCTTCTTTGATTGCGCAATGCGTGGTTACCAAGATACACTTTATGCCCACGCCCATCGTCAGTTCTACCGCAACTGCGAAATCTCTGGTACCATTGACTTCATCTTCGGCTATGGCACCACCTTGATCCAAAACTCTAGGATCATTGTGAGGAAGCCCATGTCAAACCAGCAGAACATCGTGGTCGCCGATGGAACTGACCAGAAGAACATGCCTACTGGTATTGTCCTCCAAAATTGTGAGATCATGGCTGATGCCGCCCTCTACCCAGACAGGTTGACAGTGAGGACATTCTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAGAATAACATTGGTGATTTGATCCAGCCACAAGGTTACATCCCATGGAACCCACCAACTGAGGCTAACACTGACAATTGTTACTTTGCTGAGTTTGGAAACACTGGAGCTGGTGCCAACGCCGGAGCCAGGGCCAAATTTGCAAAAGGACTTATTAACAAGAATACTGCTGCTAAATATCTTGCTGAGCCATGGATTCAAGCTAGCACCTGGGTCCCAGCCACTGGCATTTCCTACGATGCTGGCTTCATCAAGGCTTAA 1680 0.4696 MANGKVIVAGVSIILVVGVVIGTVAVVSNNTSNDQLKTHNKAVDSLCQNADDKKLCYDIIGNVNTTDPKDYVSEVVRKTLDSVIKAFNMTDTLSVEHGQSNPGMKMALEDCKDLLQSAMHELEASINLVSENNFASVYQSSAELKNWLGAVIAYQQSCMDGFDTEGEKKVQTELQSDSLDSVGKLTGLALDVVSGLSHFLNGLGLNLNLKPASRKLLEVDHEGFPTWLSAADRKLLANMDNVKPNVVVAKDGSGQFKTVLDAINSYPANFQGRYIIYVKAGVYDEYITVDKKCKNLFIYGDGNTRTIITGRKNFHEGTKTMRTATFSSNADDFIAKSIAFENTAGAEGHQAVALRVQGDRSAFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYGTTLIQNSRIIVRKPMSNQQNIVVADGTDQKNMPTGIVLQNCEIMADAALYPDRLTVRTFLARPWKAFSRAVFIENNIGDLIQPQGYIPWNPPTEANTDNCYFAEFGNTGAGANAGARAKFAKGLINKNTAAKYLAEPWIQASTWVPATGISYDAGFIKA* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1249 559 SMART PMEI_2 38 192 IPR006501 GO:0004857
Ahy19g1249 559 Pfam Plant invertase/pectin methylesterase inhibitor 42 190 IPR006501 GO:0004857
Ahy19g1249 559 SUPERFAMILY Pectin lyase-like 243 554 IPR011050 -
Ahy19g1249 559 Gene3D - 239 556 IPR012334 -
Ahy19g1249 559 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Ahy19g1249 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 197 IPR035513 -
Ahy19g1249 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 172 IPR006501 GO:0004857
Ahy19g1249 559 CDD PMEI-like_3 45 197 - -
Ahy19g1249 559 PANTHER PECTINESTERASE 5 556 - -
Ahy19g1249 559 PANTHER PECTINESTERASE 5 556 - -
Ahy19g1249 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 194 IPR035513 -
Ahy19g1249 559 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1249 Ahy-Chr19 24630427 24632512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1249 5 556 Carbohydrate Esterase AT5G49180 37.633 1.96e-128 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1249 K01051 - gmx:100808559 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1249 19 24630427 24632512 Ahy19g1248 19 24593938 24596008 ECH
Ahy19g1249 19 24630427 24632512 Ahy19g1249 19 24630427 24632512 ECH
Ahy19g1249 19 24630427 24632512 Ahy9g0983 9 19168113 19170194 hybridization