Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1246 ATGCGTGCATATCTAATTGTTTTATTTTATGGAAGTGCAGCGACAGTTGCTGAAGATTTCATTGCCAAGTCAATTGCATTCGAGAACACAGCCGGTGCAAGCAAACATCAAGCAGTGGCACTTCGCGTGCAAGGCGACCGCTCAGCTTTCTTCGACTGCGCCATTCGTGGCTTCCAGGACACACTATATGCCCACGCCCACCGCCAGTTTTATCGCAACTGCGAAATCTCCGGTACCGTTGACTTCATCTTCGGTTACTCCTCAACCATAGTCCAAAGCTCCAAGATCATCGTCCGAAAACCCGACCCAAACCAACAAAACATAGTGGTTGCAGATGGAACACCTCAGAAGAACATGCCCACAGGGGTAGTGCTACAAAACTGCGACATTTCACCAGAGGCTGAACTGGTTCCTATGAAACTAACGGTGAAGTCATATCTGGCGAGGCCATGGAAGGAGTATTCAAGGGCAATCTTCTTGGAGAACACAATTGGTGACTTGATTCAACCGGATGGGTATCTTCAGTGGTCAGGGAACATGTACCTAAACACTTGCTTCTTTGCTGAGTATGGAAACACCGGACCTGGGGCTAACGTTAATGCCAGAGTGAAGTGGGGTCGTGGGGTTCTTAATAAGAACGATGCTGCTCAGTACACTGCTGAACACTGGATTCAAGCTAGTACATGGTTGCCAGCTACTAGTATACCCTTTGATCCTGCCTTCACTAGAGGATGA 735 0.4816 MRAYLIVLFYGSAATVAEDFIAKSIAFENTAGASKHQAVALRVQGDRSAFFDCAIRGFQDTLYAHAHRQFYRNCEISGTVDFIFGYSSTIVQSSKIIVRKPDPNQQNIVVADGTPQKNMPTGVVLQNCDISPEAELVPMKLTVKSYLARPWKEYSRAIFLENTIGDLIQPDGYLQWSGNMYLNTCFFAEYGNTGPGANVNARVKWGRGVLNKNDAAQYTAEHWIQASTWLPATSIPFDPAFTRG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1246 244 Gene3D - 10 241 IPR012334 -
Ahy19g1246 244 PANTHER PECTINESTERASE 13 238 - -
Ahy19g1246 244 Pfam Pectinesterase 13 226 IPR000070 GO:0030599|GO:0042545
Ahy19g1246 244 SUPERFAMILY Pectin lyase-like 15 237 IPR011050 -
Ahy19g1246 244 PANTHER PECTINESTERASE 13 238 - -
Ahy19g1246 244 ProSitePatterns Pectinesterase signature 2. 76 85 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1246 Ahy-Chr19 24570597 24571513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1246 14 237 Carbohydrate Esterase AT4G33220 46.460 9.36e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1246 K01051 - ahf:114925941 502.671