Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1245 ATGGAAAAGACGAAGGTTGCTTCTGCAGTTTCTCTCCTTCTAGTGGTGGGTGTTGCAGTGGGTGTTGTTGCCATTGTCCGCACCAACGACGAGAAAGTCACCGGCACAACCGGTAACGACGGCGGATTAATAAGTACACATAGCAAGGCCGTTAAGGCCATGTGCCAAAACTCCGACGACCGAAGACTATGCCTAGACACACTGAATCCTGTAAACCACACGGATCCAAAAGAGTACATATCAACGGTTGTAAAGAGATCGTTGGAAAGCGTCATCAAGGCCTTTAACATGAGCGATAGGCTCAGATTGGAGCACGATAACAGCACCCCGGGGGTCAAGATGGCCCTCGAAGATTGCAGAGACCTGCTCCAATTCGCCATTGGGGAGTTACAAGCAACAAAAACAGTCCTTCAGGGCAACACAATAAATCACGTACATGATCGCGTCGCCGACCTCAAGAATTGGTTAGGGGCTGTTTTCGCCTTCCAACAATCGTGCCTGGACGGGTTCCACACCCACCACGAGAAGCAGGTTCGGTCGCAGTTGCAAACCGGAAGCTTGGACCACGTTGGGAAGGTTACGGCGTTGGCTCTTGACGTTGTGTCTCGGATTGCACATGTGCTGTCAAATTTTGACTTACACCTTATCGTTAAGCCTTCTTCACGGCGTTTAATTGAGGTTGATCAAGATGGTTACCCGGCTTGGTTCGGCGTTACGGATCGGAAGCTCTTGGGTGACGTCAGCAAGGGAGGTAGCATTGCTCCCAATGCAGTTGTTGCTAAAGATGGGAGCGGGCAATTTAAGACTGTTTTGGATGCCATTAATGCGTACCCTAAAAACAATAAGGGGAGATATGTTATCTATGTTAAGGCTGGCATATATGATGAGTATATTACTGTGGATAAGAACAAGAAAAATATTTTGATGTATGGAGATGGCCACACCAAAACCATTATTACTGGTAATAAAAATTTTGTTGATGGCTGGAAGACAATGAGAACTGCTACCTTTGCTGTGTTCGTGTGA 1026 0.4737 MEKTKVASAVSLLLVVGVAVGVVAIVRTNDEKVTGTTGNDGGLISTHSKAVKAMCQNSDDRRLCLDTLNPVNHTDPKEYISTVVKRSLESVIKAFNMSDRLRLEHDNSTPGVKMALEDCRDLLQFAIGELQATKTVLQGNTINHVHDRVADLKNWLGAVFAFQQSCLDGFHTHHEKQVRSQLQTGSLDHVGKVTALALDVVSRIAHVLSNFDLHLIVKPSSRRLIEVDQDGYPAWFGVTDRKLLGDVSKGGSIAPNAVVAKDGSGQFKTVLDAINAYPKNNKGRYVIYVKAGIYDEYITVDKNKKNILMYGDGHTKTIITGNKNFVDGWKTMRTATFAVFV* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1245 341 SMART PMEI_2 46 200 IPR006501 GO:0004857
Ahy19g1245 341 PANTHER PECTINESTERASE 3 339 - -
Ahy19g1245 341 SUPERFAMILY Pectin lyase-like 253 339 IPR011050 -
Ahy19g1245 341 PANTHER PECTINESTERASE 3 339 - -
Ahy19g1245 341 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Ahy19g1245 341 CDD PMEI-like_3 53 205 - -
Ahy19g1245 341 Pfam Pectinesterase 256 339 IPR000070 GO:0030599|GO:0042545
Ahy19g1245 341 Pfam Plant invertase/pectin methylesterase inhibitor 50 198 IPR006501 GO:0004857
Ahy19g1245 341 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 205 IPR035513 -
Ahy19g1245 341 TIGRFAM PME_inhib: pectinesterase inhibitor domain 46 180 IPR006501 GO:0004857
Ahy19g1245 341 Gene3D - 250 340 IPR012334 -
Ahy19g1245 341 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1245 Ahy-Chr19 24568458 24570442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1245 6 320 Carbohydrate Esterase AT3G62170 33.043 3.46e-51 177