Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1244 ATGAAAGGAAAGATAATAATTTCTGCCACCTGTCTCATCCTCGTGGTGGGTGTGGTCATCGGAGCGGTGCTTATTGCAAACAAGAAGGATGACTCCGGTGCTGACAACATTGAACTTCATGATAAAGCCGTTGCCACAATGTGCCAAAACGTTCTCAACCAAACTCTTTGCCGTGACATCTTGGGCCCAGTGAAGGGAACCACAGACCCCAATGAATTCATTGCGGCCGCAGTGAAAGCCGCCACGGAAAGCGTCATCAAGGCCTTGAACATGAGTGACAGGCTAACAGTTGAAAAAGGAAACGGCAACCCAGGCATCAAGATGGCACTGGAGGATTGCAAAGACCTCTTGCAATCAGCCATGGACAGTCTCCAACTTTCAACATCGTTGGTGGACAGCAAGAATATCCAGACAATTCATGACCAGTCCGCCGACTTCAAGAATTGGCTAGGCGCTGTCATCTCCTACCAACAAACCTGCCTCGACAACTTCAACGAAACCGACAGCGGCGAGAAAGTCATCAAGGAACAGCTTAACGCAGAGACCCTAGACCAAGTTATGACCACAACAGGACTCACTCTTGATATCCTCGCCGACTTGGACAGGATCCTCGGCCAATTCAACTTGAAGATCGACGTCCACCCTGGCTCTCGCCGCCTTCTAGCCGCCGATGTCGATGACCAAGGGCTCCCGACCTGGCTCTCTGCCTCAGACCGGGACCTCTTGGCTGAAGTCGATGTCCACTTGGCTAAGAGACACCTCCTAGCGAAGGTAAAGGGCAAGGGTAAGGGTAAGGGTAAGGGCAAGGGCAAGGGAAAAGGTAAAGCTATTGCTGCTGGTGCCGCTGCTGGTGCTGTTGCGGGTGCTGCAGTTGGTGCTGCTGCCGGTGGTGATCAGGTTAAATTCTCTCCTGGATCCATTGAACCGGTGACCCGAGGACCAGCCCATGTGGTGGTTGCTCAGGATGGAAGTGGCCGATTCAGGACTATCAAGGAAGCTATTGATTCTTACCCACCTGGCTTCAAGGGTAGATACGTCATTTACGTTAAGGCTGGTCTCTATAATGAGTACATTATTATTCCTAAGCATGCTGTGAACATTCTTATGTACGGTGATGGCCCTACAAGGACTATTGTCACTGGTCGTAAGAACTTTGTTGAAGGCGTGAAAACAATGCATACCGCCACTTTTGCCAATACTGCTGATGGATTCATTGCTAAGGCAATGAGGTTCGAAAACACCGCTGGTCCGAAAGGACACCAAGCTGTGGCACTTCGAAACCAGGGAGACAAATCAGCTTTCTTCCAATGCCATATCTTTGGTAATCAAGACACCTTGTACGTCCAAACCAACCGTCAATTCTACCGAGACTGCGAAATCTCCGGCACCATTGACTTCATCTTTGGCACATCTCCAGCCTTGATCCAAAACAGCAAGATCATCCTGAGGAAGCCTGATGATAAACAATTCAACACTGTAACTGCCGACGGCACAACGCAACCCAACATGCCCACCGGAATTGTCCTCCAGAACTGTGAGATTGTCCCAGAGCCTGCTCTGTTCCCTGCGAGGTTCACCACCAAGTCATACTTGGGTAGGCCATGGAAGCCTTACTCAAAGACACTGATCATGGAATCAATGATCAGCGATGCCATTCACCCAGAAGGGTGGTTTCCTTGGGCTGGAACCGTGCACCTTGATACTTTGTGGTACGCTGAGTATGCAAATACTGGACCTGGTGCCAATGTTCAAGGAAGGATTAAGTGGAAGGGTTATCATGGCCTCATTAGTAGGAATGAAGCTGCACGGTTCACTGCTGCTGAATTTCTCAGAGGTGGACCCACTAGCGCTGCTGAACCATGGTTGAGTGCTACTGGCATTCCATTTACCGTTGGCTTTACAAGGGCTTAA 1911 0.5003 MKGKIIISATCLILVVGVVIGAVLIANKKDDSGADNIELHDKAVATMCQNVLNQTLCRDILGPVKGTTDPNEFIAAAVKAATESVIKALNMSDRLTVEKGNGNPGIKMALEDCKDLLQSAMDSLQLSTSLVDSKNIQTIHDQSADFKNWLGAVISYQQTCLDNFNETDSGEKVIKEQLNAETLDQVMTTTGLTLDILADLDRILGQFNLKIDVHPGSRRLLAADVDDQGLPTWLSASDRDLLAEVDVHLAKRHLLAKVKGKGKGKGKGKGKGKGKAIAAGAAAGAVAGAAVGAAAGGDQVKFSPGSIEPVTRGPAHVVVAQDGSGRFRTIKEAIDSYPPGFKGRYVIYVKAGLYNEYIIIPKHAVNILMYGDGPTRTIVTGRKNFVEGVKTMHTATFANTADGFIAKAMRFENTAGPKGHQAVALRNQGDKSAFFQCHIFGNQDTLYVQTNRQFYRDCEISGTIDFIFGTSPALIQNSKIILRKPDDKQFNTVTADGTTQPNMPTGIVLQNCEIVPEPALFPARFTTKSYLGRPWKPYSKTLIMESMISDAIHPEGWFPWAGTVHLDTLWYAEYANTGPGANVQGRIKWKGYHGLISRNEAARFTAAEFLRGGPTSAAEPWLSATGIPFTVGFTRA* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1244 636 TIGRFAM PME_inhib: pectinesterase inhibitor domain 37 181 IPR006501 GO:0004857
Ahy19g1244 636 Pfam Plant invertase/pectin methylesterase inhibitor 43 180 IPR006501 GO:0004857
Ahy19g1244 636 SMART PMEI_2 39 196 IPR006501 GO:0004857
Ahy19g1244 636 SUPERFAMILY Pectin lyase-like 314 631 IPR011050 -
Ahy19g1244 636 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 202 IPR035513 -
Ahy19g1244 636 PANTHER PECTINESTERASE 3 266 - -
Ahy19g1244 636 ProSitePatterns Pectinesterase signature 2. 460 469 IPR033131 -
Ahy19g1244 636 Gene3D - 313 633 IPR012334 -
Ahy19g1244 636 Pfam Pectinesterase 316 612 IPR000070 GO:0030599|GO:0042545
Ahy19g1244 636 PANTHER PECTINESTERASE 308 634 - -
Ahy19g1244 636 CDD PMEI-like_3 46 202 - -
Ahy19g1244 636 PANTHER PECTINESTERASE 3 266 - -
Ahy19g1244 636 PANTHER PECTINESTERASE 308 634 - -
Ahy19g1244 636 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 174 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1244 Ahy-Chr19 24473563 24476202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1244 1 633 Carbohydrate Esterase AT2G47040 34.172 2.81e-118 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1244 K01051 - gmx:100808559 548.125