Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1217 ATGGCTGTCAAAACCCGTTTCCAAGTGATTATGATGATGATCACTGTGTTCCTTCTTTCATCTTTATGCATCACTTTGGGAACCAAATTAAAAGTTGTTGGAGGTAGTGGTCCAGATTTAAGGCTTAGAGATGCTGAGAGTAACAAAGTTAGAATAACGGTAAGTCAAGACGGTGCTGGTGACTTCAAGACCGTTACAGATGCTGTTAATAGCATCCCTCAATGGAACAATAGGAGATTCATTCTGTACATTGCACCAGGTATTTATAGGGAGAAGATAATGATCCCAAGAACGCTTCCTTTTGTTACATTCTTAGGGGATGCTAGTGATCCACCAACCATTACAGGGAATGATACAGCTTCTATCCTTGGAAGAAATGGAAAACCAATTGGCACTTTCCAGAGTGCAACAGTTGCTGTCGACGCTAACTATTTTCTTGCCATCAACATCAAATTTGAGAACAGAGCTGCACACTGGATTGGAAGGAGAGGGGAACAAGGAGTGGCGCTTCGAATTTCAGGGACCAAAGCTGCATTTTACAATTGCACATTCTATGGCGCTCAGGACACATTATATGATCACAAAGGCCTTCATTACTTCAACAATTGCCTCATTCAAGGTTCTGTTGATTTCATCTTTGGCTCTGGCAGGTCTCTTTACGAGAACTGCTATCTAAATTCCACAACAAGGAAGGTGGCTTCCATCACAGCTCAAAAGCGAACAAATTCATCAATGGAAAGTGGATTTTCGTTCAAAAACTGCACAGTCACAGGGAGTGGCCAAGTTTTTCTTGGACGAGCCTGGGGCGATTATTCAACGGTTGTTTTCTCTTACACCTTCATGGACAAAATTGTCCTTTCACAAGGATGGAGTGACTGGGGTGATCAAAAGCGCGACTTGAGAGTATATTATGGAGAATACAAGTGTAGTGGCCCTGGGGCTAATTTGACTGGAAGAGTACCATGGGCAAGGATGCTTACAGATGAAGAGGCCAAGCCCTTCATTGGGATTCAATTCATTGAAGGAGATTCTTGGCTCATCAGCCCCTGA 1050 0.4305 MAVKTRFQVIMMMITVFLLSSLCITLGTKLKVVGGSGPDLRLRDAESNKVRITVSQDGAGDFKTVTDAVNSIPQWNNRRFILYIAPGIYREKIMIPRTLPFVTFLGDASDPPTITGNDTASILGRNGKPIGTFQSATVAVDANYFLAINIKFENRAAHWIGRRGEQGVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCLIQGSVDFIFGSGRSLYENCYLNSTTRKVASITAQKRTNSSMESGFSFKNCTVTGSGQVFLGRAWGDYSTVVFSYTFMDKIVLSQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVPWARMLTDEEAKPFIGIQFIEGDSWLISP* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1217 349 PANTHER PECTINESTERASE 36 347 - -
Ahy19g1217 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 347 - -
Ahy19g1217 349 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Ahy19g1217 349 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Ahy19g1217 349 Pfam Pectinesterase 52 343 IPR000070 GO:0030599|GO:0042545
Ahy19g1217 349 Gene3D - 46 348 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1217 Ahy-Chr19 23152402 23157424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1217 52 346 Carbohydrate Esterase AT5G47500 48.822 3.04e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1217 K01051 - qsu:112011696 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1217 19 23152402 23157424 Ahy19g1217 19 23152402 23157424 ECH
Ahy19g1217 19 23152402 23157424 Ahy9g0951 9 18319103 18327012 hybridization