Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1210 ATGTATGAAGGCTATGCTATAGACTGGAGTCTTCTTGTTCCCGGAGTCGGAAGGCTTGTATCTGAATTCAATTCAAGAATGGCAGTTACACATGCTGATCTCGAACCAAACACAGGGAAGACATGTTTGATGAGCAGCAAAACTGGTGTATTCCTCGTACTTGTCACAATCCTATTGGGACTCTCCTCCTTCACTCTCTGCCTCATAACAAAAGCCACACGTTCTCAGGATCATGGGATTGGATTTATCACTCATTCATGGTGGACTTTAGTACCTTGCGGCCAGTTCTACTACTACTACTTTCTGCACTGTCAAAAAATATTAAAGAATAAAATTGAGGTTTGTGCTATGAAGTTTAATGTCCTTGTGACTACTTATGAGTTTATCATGTATGATCGATCAAAGCTTTCAAAAGTCGATTGGAAATATATCATAATTGATGAAGCACAGAGAATGAAGGATATGGATTCAGTCCTGGCCCGTGATCTTGATAGGAAAACTCCCAATGTAATAGAACTAACAATATTTCTTAGTTTGATACTTTGCATAGGAGTTATTATTTTTTATTTGTAA 573 0.3787 MYEGYAIDWSLLVPGVGRLVSEFNSRMAVTHADLEPNTGKTCLMSSKTGVFLVLVTILLGLSSFTLCLITKATRSQDHGIGFITHSWWTLVPCGQFYYYYFLHCQKILKNKIEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDMDSVLARDLDRKTPNVIELTIFLSLILCIGVIIFYL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1210 190 PANTHER ATP-DEPENDENT HELICASE BRM 113 165 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Ahy19g1210 190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 169 IPR027417 -
Ahy19g1210 190 PANTHER SNF2/RAD54 HELICASE FAMILY 113 165 - -
Ahy19g1210 190 Pfam SNF2-related domain 114 161 IPR000330 GO:0005524|GO:0140658
Ahy19g1210 190 Gene3D - 96 174 IPR038718 -
Ahy19g1210 190 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 33 174 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1210 Ahy-Chr19 22937080 22941467 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy19g1210 SNF2_N 1.90E-07 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1210 - K11647 aip:107619011 388.652