Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1205 ATGGAGAAGGATAACATGGATTTGAAGAAGACTGAGGATGCTGTTGCTTTTGGATCCTCAAACGGTTATTATAATAATCCGTTGTTATTGTCGAGTGCGTTTGATTTCAGCTGTGAAGTGGAGAAAAGCTCGTTTATGGAGTTGCTGGGAGTGCAGGACTACTATAATAATAGTGGTGCTGTGCTTGATTTGCCACAGTTATCAAAAGCTACAGTTTTTCCTTTTACCACGGTTAACGCTTCTTGTGACGATACTGCTAAAGAGTGTTCTGAAGTGTTGAACCAGAAGCACCAACCTGCAACTCCGAATTCGTCTTCGATTTCGTCAGCGTCGAGTGAAGCTGTCAACGATGAACACAATAAAACTGTAGAACAAGATGATGATGATGATGATGATGATAGTGAAGAAGATGAAGGAGAAGAAGAGCAGCAGAAAAAGACTAAGAAAGAGTTGAAGGCAAAGAAGACAAAGCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGACGGTTACAGATGGAGAAAGTACGGTCAAAAGGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTAAAGAAGCGTGTGGAGCGGTCATTTACTGATCCAAGCGTTGTGGTAACTACCTATGAAGGCCAACACATACATCCAAGCCCAGTTATGCCTCGTTCAGCCATTGCCGGCGTTGGATCTCCGATGATGCCGCCGGCTGTCTCCACTGCCAACTTGGGTTCTCTCATGCCTGGAAACTACATGTCGCACTATCATCAGCATCGCCACCACCACCAACAACTACTAGTGAATACATTGTTCTCCTTGGGCATCCCTTACAACAATAGCAACAATATTGATAACTCTTCTTTTTCTCAAGACAATGGGCTTCTTCAAGATATTGTTCCTTCACACATGCTGAAAGAGAAGTAG 978 0.4387 MEKDNMDLKKTEDAVAFGSSNGYYNNPLLLSSAFDFSCEVEKSSFMELLGVQDYYNNSGAVLDLPQLSKATVFPFTTVNASCDDTAKECSEVLNQKHQPATPNSSSISSASSEAVNDEHNKTVEQDDDDDDDDSEEDEGEEEQQKKTKKELKAKKTKQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHIHPSPVMPRSAIAGVGSPMMPPAVSTANLGSLMPGNYMSHYHQHRHHHQQLLVNTLFSLGIPYNNSNNIDNSSFSQDNGLLQDIVPSHMLKEK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1205 325 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy19g1205 325 PANTHER WRKY TRANSCRIPTION FACTOR 9 313 - -
Ahy19g1205 325 Gene3D WRKY domain 160 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy19g1205 325 SUPERFAMILY WRKY DNA-binding domain 169 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy19g1205 325 Pfam WRKY DNA -binding domain 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy19g1205 325 PIRSF WRKY_txn_fact_IIc 1 325 IPR017396 GO:0003700
Ahy19g1205 325 Coils Coil 134 161 - -
Ahy19g1205 325 MobiDBLite consensus disorder prediction 123 140 - -
Ahy19g1205 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 313 IPR044810 GO:0003700
Ahy19g1205 325 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy19g1205 325 MobiDBLite consensus disorder prediction 95 116 - -
Ahy19g1205 325 MobiDBLite consensus disorder prediction 95 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1205 Ahy-Chr19 22836286 22838798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1205 99 325 WRKY Transcription Factor Family AT2G47260 54.733 3.55e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy19g1205 WRKY 7.70E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1205 - - aprc:113872234 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1205 19 22836286 22838798 Ahy19g1205 19 22836286 22838798 ECH
Ahy19g1205 19 22836286 22838798 Ahy9g0943 9 18007304 18010586 hybridization
Ahy16g0731 16 13336532 13338618 Ahy19g1205 19 22836286 22838798 PCT
Ahy6g0604 6 7454642 7456641 Ahy19g1205 19 22836286 22838798 PCT
Ahy19g1205 19 22836286 22838798 Ahy16g0731 16 13336532 13338618 PCT
Ahy19g1205 19 22836286 22838798 Ahy6g0604 6 7454642 7456641 PCT