Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1200 ATGGTGAGCGAGCGTTTCTCTTCAACAGGTTTCAATCTCAACGGAATCCTTGACGGTTATGGTTCAATACAAGAAGAGCATGTTGAGTTTCGAGTGGAAGACACCACCAACACCTCAACAATAACGGAATTTCTTGGAGACATGAATAACAATAATCCAATCTCTTATAATGAGAAAAACGAGCCCCAGCAACATGATGATTTCAAGTTTGATAACTTGGTGCTAGAAGAGTTCAGCTTTTACCCTGATCCACATCAAAAGACACAACCATTATTATTGCCACAAAAGAATAATAATAATCAATCGTTAGTCAGAAAAACAAGTTCGGTTGAACCACCACGGTCGCCACCTCCGCCTCCTTCATGGGAGCTCCTCTGCAGTTACGGAAGCAGGATCCAGAGGTTAGGACGGAGAAACTTAAGCGGCGCCAGCGAAGAAGCGAAAACTAGCACTAGCATTAGTCCCCAGAAGTTATCAACAGAGGAAATAGTAAGATTGGCAGGAGCAAGGTATGTGCAATACTCTTCACAATGGCAAGATAATTGGTTCATGCCAATGCATCCTTATGCTCAAATTGGTTTCATGATTTTGTCTGAAGAAGAAAATAGGGACATTGACCTTGCCCAATTTCTCCTAGCTTCAGCTGATAAGATTGGGTGCCAACAATTCGAGCGTGCAAATTCATTGCTCCTTCAATGCCAATGGAATTCATCAAATCTTGGGAACACAGTTCAGAGACTCGTCTTTCATTTCTCTTGCGCACTAAAAGAAAGGCTGAATAGAGAGATAGGAGGGATGGTGTTAGAGAGGAATTCGCAGAGGGAACTGGTTGAAGCAATGCAAATGGATCATAACTCGGCGATTGCATGCCATCAAAAGCTTCCTTTTAATCAAGTGATGCAATTTGTTGGTGTGCAAGCTTTGGTTGAGCATGTTGCATCAAAAACCAAAATCCATTTGATAGATCTTGGGCTTGGATATGGGCTGATGGCGACAGTTCTTATGCAAGCTCTGGCAGAGCGAAGCGAAAAGCCGGTCGAGCTTGTGAAGATAACTGCCGTTGGATGTGGAAGCAAGAGGGTGCTAGATGAGGCAGGGAGGAGGTTGGTGAGTTTTGCCAAGTCCTTGAAGTTTCGCATTTTGTTTAAGACAGTTTTTGTTGAAGACATTACAGAATTAAGGGAAGATCATTTTGAGATTGAAAATGATGAAGCTGTGGCCGTGTACTCTCCCAATACCCTGAGGATTTTGGTGCCAAGTCCTGATTCCTTGGACAACTTGATGAGGGTGTTAAGGAAGATTAAACCGGCTATTATGGTTGTTGTTGAGATTGAAGCAAACCACAACTCCCCTTTATTTGTGAATCGATTCATTGAGTCCTTGTTTTTCTTTTCAGCATATTTTGATTGCATTGAAACGTGTCTAAATCAGGAGAATGAGTGCAGGATGAGATTAGAAGCAATATTATCTGAAGCAATACGAAACATTGTTGCATTGGATGACAAAGAGAGAGCAGCTAGGAATGTGAAGATACATGTTTGGAGAAGGTTTTTTGCGAGATTTAGAATGTTTGAAACTGAATTTAGTGAGTCATCGGTATACCAAGGTAATTTGGTTATTAAAAAGCTTGGTTTGAGTAACATTTGCACGTTAGATAAGAATGGAAAGAGTCTTATCATTGGATGGAAGGGGACCCCAATTCACTCCATCTCAGCATGGAAGTTTCTTTGA 1731 0.4154 MVSERFSSTGFNLNGILDGYGSIQEEHVEFRVEDTTNTSTITEFLGDMNNNNPISYNEKNEPQQHDDFKFDNLVLEEFSFYPDPHQKTQPLLLPQKNNNNQSLVRKTSSVEPPRSPPPPPSWELLCSYGSRIQRLGRRNLSGASEEAKTSTSISPQKLSTEEIVRLAGARYVQYSSQWQDNWFMPMHPYAQIGFMILSEEENRDIDLAQFLLASADKIGCQQFERANSLLLQCQWNSSNLGNTVQRLVFHFSCALKERLNREIGGMVLERNSQRELVEAMQMDHNSAIACHQKLPFNQVMQFVGVQALVEHVASKTKIHLIDLGLGYGLMATVLMQALAERSEKPVELVKITAVGCGSKRVLDEAGRRLVSFAKSLKFRILFKTVFVEDITELREDHFEIENDEAVAVYSPNTLRILVPSPDSLDNLMRVLRKIKPAIMVVVEIEANHNSPLFVNRFIESLFFFSAYFDCIETCLNQENECRMRLEAILSEAIRNIVALDDKERAARNVKIHVWRRFFARFRMFETEFSESSVYQGNLVIKKLGLSNICTLDKNGKSLIIGWKGTPIHSISAWKFL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1200 576 Pfam GRAS domain family 208 574 IPR005202 -
Ahy19g1200 576 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 55 574 - -
Ahy19g1200 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 574 IPR005202 -
Ahy19g1200 576 ProSiteProfiles GRAS family profile. 198 574 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1200 Ahy-Chr19 22541122 22542852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1200 195 575 GRAS Transcription Factor Family AT1G66350 26.702 8.66e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy19g1200 GRAS 7.30E-73 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1200 - - aip:107615215 1125.92