Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1195 ATGTCGAAGGACAAAGACTTTACCGATGTTTCGCTCACCTTCAAATACCTCTTAGGTTATCAAAGAAGTGTTACTAATGGTAAGCTTCAAAAAAAGATGAATGATGAAAAAAAAAAGATTACAAGCAGCAATCCAACTCTGAAGCCCGTGGCCGACTTTGTCCATCTCCTCCGCAAACAAAAGCACTTACTTGTCTGGTCTGATTTTCATGTAAGAGACGGCATTGCCATATACATTTACAAACCTTATAAAAGAATGAAAATTGATGCTAGAAGAAAGGCAGAGGCATCAAGCAATAGCCAATTTCTTGCAAACATGAGCCATGAATTGAGGACACCTATGGCTGCAATAATTGGGCTACTTGACATTCTTATGTCCAACGACTGTCTAACCAACGAACAGTGTGCAACGGTTACTCAGATAAGAAAATGCTCGACGGCGCTGCTCCGGCTTCTTAATAACATCCTGGATCTCAGCAAGGTTCTTTTGTCAATTTGCTCAATGTTGACGGATCCCAACTCTGATGATCCTCTTGTCCCTGAAATTACGCACATGTACAAGACTGACAGGGCTAAGTATGAAGCTACTGCACGTAGCTGA 600 0.415 MSKDKDFTDVSLTFKYLLGYQRSVTNGKLQKKMNDEKKKITSSNPTLKPVADFVHLLRKQKHLLVWSDFHVRDGIAIYIYKPYKRMKIDARRKAEASSNSQFLANMSHELRTPMAAIIGLLDILMSNDCLTNEQCATVTQIRKCSTALLRLLNNILDLSKVLLSICSMLTDPNSDDPLVPEITHMYKTDRAKYEATARS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1195 199 Pfam Ubiquitin-conjugating enzyme 154 198 IPR000608 -
Ahy19g1195 199 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 95 160 IPR036097 GO:0000155|GO:0007165
Ahy19g1195 199 Gene3D - 81 161 - -
Ahy19g1195 199 SMART HisKA_10 98 164 IPR003661 GO:0000155|GO:0007165
Ahy19g1195 199 Pfam His Kinase A (phospho-acceptor) domain 98 160 IPR003661 GO:0000155|GO:0007165
Ahy19g1195 199 PANTHER TWO-COMPONENT HISTIDINE KINASE 88 161 - -
Ahy19g1195 199 CDD HisKA 100 160 IPR003661 GO:0000155|GO:0007165
Ahy19g1195 199 SUPERFAMILY UBC-like 155 198 IPR016135 -
Ahy19g1195 199 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 24 199 IPR000608 -
Ahy19g1195 199 PANTHER OSMOSENSOR HISTIDINE KINASE 88 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1195 Ahy-Chr19 22386741 22389810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1195 87 161 Histidine Kinase Gene Family AT2G17820 87.013 1.99e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1195 - - ahf:112776726 316.62