Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1179 ATGGCTTCAGTTTACCGCAATTCGAGCTCAGGATCGGAGGGCGGAGAGCCCGTGATGGATGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCGGCGCGGCGGTCGCGGATGAGGAAGCAAAAGCAGCTGGAGGATTTGACGGAGGAGGTGAAGCGGCTTGAGGCCTCGAACAAGCAGTTGATTGAGGCCATTAAGATGAAGGAGGAATCTTATGCAGAGATTGAATCCTCAAACGGCGTCATCAGGGCTCAGATCACGGAGCTTGGGGACAGGCTTAAGTTCCTCAATTCCATCCTCGAAATTGCTGAAGTCGTAAGCGGCGGTGAGCTCTCCGTTGATTTACCGGAGATTCTGGATCCTCTCATGAAGCCTTGGCAGATTCCTTACCCATTTCAGCCAATCATGGCTTCGGCAGACATGTTCCTGCATTGA 438 0.5297 MASVYRNSSSGSEGGEPVMDERKRKRMLSNRESARRSRMRKQKQLEDLTEEVKRLEASNKQLIEAIKMKEESYAEIESSNGVIRAQITELGDRLKFLNSILEIAEVVSGGELSVDLPEILDPLMKPWQIPYPFQPIMASADMFLH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1179 145 Coils Coil 31 72 - -
Ahy19g1179 145 MobiDBLite consensus disorder prediction 16 47 - -
Ahy19g1179 145 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 143 - -
Ahy19g1179 145 CDD bZIP_plant_GBF1 23 74 IPR045314 GO:0003700|GO:0006355
Ahy19g1179 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 143 - -
Ahy19g1179 145 MobiDBLite consensus disorder prediction 1 47 - -
Ahy19g1179 145 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Ahy19g1179 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 78 IPR004827 GO:0003700|GO:0006355
Ahy19g1179 145 Pfam bZIP transcription factor 22 79 IPR004827 GO:0003700|GO:0006355
Ahy19g1179 145 SUPERFAMILY Leucine zipper domain 22 73 IPR046347 GO:0003700|GO:0006355
Ahy19g1179 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Ahy19g1179 145 Gene3D - 20 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1179 Ahy-Chr19 22095330 22096650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1179 18 143 bZIP Transcription Factor Family AT3G62420 58.730 3.79e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy19g1179 bZIP_1 9.50E-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1179 K25786 - gmx:780550 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1179 19 22095330 22096650 Ahy19g1179 19 22095330 22096650 ECH
Ahy16g0706 16 12964889 12966331 Ahy19g1179 19 22095330 22096650 ECH
Ahy19g1179 19 22095330 22096650 Ahy9g0918 9 16860296 16861617 hybridization
Ahy16g0706 16 12964889 12966331 Ahy19g1179 19 22095330 22096650 PCT
Ahy6g0624 6 7660426 7661849 Ahy19g1179 19 22095330 22096650 PCT
Ahy19g1179 19 22095330 22096650 Ahy16g0706 16 12964889 12966331 PCT
Ahy19g1179 19 22095330 22096650 Ahy6g0624 6 7660426 7661849 PCT