Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1173 ATGAATCTCTTTCGACCTTCGTCACTCATGTTGGTGCTGGTGGCTCCGTTATTATTTCAAGCATTTGAGAGGGTTCCTCACTTAGAGCAAATTTCATACATAGTCATGGAAGGTCTCTCCTTTTCATATTATAGAGATCATCTTCAAATTTTGGCAATGTTCTCCAACTCATCATCTTCATCTACTCTATATTATATCCAACATGTAAATCAAGATAATGGAGAAGCCTATGGTGAACCTACAAAATACAATTTTTCGTCTATTAACACAAGTTGGATTTCTGAAGCTCTTGAATTTTCTTATTCATACGCATTCAGCAATACTTCATCATTGGGAACCAATTGGAGCATTATTATTGATAGTGGCCATAACCCTTTGTTTCTCAACTCCGCAAGGGTCACAAGAACAAGTGTGATCTCTCTAGGGTTCTCGGAAACAACAGTAACGGATTTTCTCAGGACTCAAAACAATGATCTTCATCAAAGTTCAATGAGCATGTCTTGGGCCACAAAAGATGGAAGGGCTATTGTACAAGGGATCCGAAATACTCGTTTGGTGATTTCTAATGATACAGTTTTGCTTCAATTATTGGACCAAAATGGAAACCCTAAAGGTGTTGGAGACACTGCTATACCGTGCAAAAATGAAAGATTTGGATCTAGTTTGAATATTCAGAATACTGAATATATGATTCACTGCAGCACAATTGATATCATGGGAATAGAATCGGTATATGTTGTGGCTATTCCAAAGAATGAATTACTTAGCTTTGACCAGCATTATAAGAAAAAAGGGTTGACTCTGTTGATTGTAATGATATTCATGATATTGATTGCTCTCCTAAGCTTTCTAAGCATGAATGCAAGAAATGCGAAGCGAGAAATGCGATTGCGTGCCTCACTCTTGAAACAAATGGAAGCTACTCAACAAGCTGAGAGAAAGAACATGAATAAAAGCCTTGCATTTGCTGCTGCCAATCATGATGTTAGGGCTTCTCTTGCAGGCCTTACTGCTTTGATAGACATGTCCTTTGACTTTGTTCAAAATGCGTCTGAATTGGACACCAACTTAAAACAAATGAAAGGTTGCACCCAAGACTTACTAGGGCTGCTGAATTCTATACTTGACACAAGCAAAATTGAGGCTGGAAAAATACAGCTTGAGGAAGAGGAATTTGATGTATCAATTCTGTTGGAAGATATAGTTGACTTATACCACCCTATGGCTTCAAAGAAAGGTGTGGATCTAATCTTGGACCCTTGTGATGGTTCTATTATTAGATACTCACGTGTTAAAGGAGACAGAGGAAGACTCAAACAAGTTTTGTGTAATCTTTTGAGCAATGCTGTTAAATTTACTGATGAGGGGCACATAGTGGTTAGGGCAAGAGCTCAAAAGCCAAGTTTGCATAATTCATTAATGGCTGGTAGTGAAAAACATGTATCATGCTTATGTTTCAAGAAAATTAGCAGTGATGAAATTGAAGGCACGAGTAATTCAACACAAGCAGATCCATATTGCGTTATGGATTTTATATTTGAAGTGGATGATACGGGAAAAGGAATCCCCAAAGAGAAGTACAAGTCTGTGTTTGAGAACTATGTCCAAGTCAAAGAAACCTCTCTTGGAGTTGGAGGAACTGGCTTGGGACTTGGGATCGTGCAATCACTGGTGCGTTTGATGCATGGAGACATTGAAATTTCAGAGAAGGACGTGGGAGAAAAGGGAACATGCTTCAAGTTCAATGTTGTCCTTAATGTATACGAGACAATCACGAATGCTGCTAGCACAAAAGAAGAAGAAGAAGAAGGTGTTGATGAAAGAAACCAAACTCAGGCGGCATTACCAACCCTTCAAAGTTGTAGCTCTGGTTCAAGCATTTGTTCCCTTAGTCCAAGATTCCGAATCCGCAGCTCCAGTCCCAAGCCAGCGCCTTCTCGTGTCATTATGCTAATCGCCGATGAGTATCGCCGGAAGGCCACAGAGAAGTTCATGGAGGGCTTAGGGATCAAAGTTGCCGCCGCGAAACGGTTGGAGGATCTATTTGATGTCCTGAAGAAGATGAAACACAAGTGTCTCTATTCAAGCAGCCACAGTAGTGGTTCTCAAGGATCAGAGTATTTGAGTGCGAGCTCTCACTCCCGTTCCAGCAGAGTTAGAGTTGCATTGAGTTCTATGGATGGAAAGACGGATATTGGAGCAGCATCTGATGGCTTTATCCTTATTGTGGTTGAGACAGATGCAGGGCCACTTTTGGAGCTGTGTAAGATAGTTTCCAACTTCAAAAGAGGGCTTTGTAACCCTTGTCAAGTTGTTTGGTTAGATAACAAAATTCTCTTTAAGAACCTTGATAAGGACACGCTTGATCCCAAAGACATGGTTCTATCGAAACCGTTTCACGGTAGCCGTTTGTTCCAGGTTATAAAGCTTCTTCCCGAGTTCGGTGGTGGGAAAAGCTCATCCAAATTGAACACTCAGGAATCCTTTGTGGATCAACCTTCTGTTGGGTCCAAAGAAATACAAGAATGTGAGGATACAGAAAAGCCATTGAGTGGTAAGAAAATTTTGGTTGTTGATGATACTCCATTGATGCGCATGATTGCTTTGCGTACTTTGATCCAGCTTGGAGCGATTATAGAGCAGTGCGAGAATGGAGAAGCAGCTGTGCATCTAGTTCGTGATGGTTTAATCAAGGATTTTCCTAATCCCCCTTACGATTACATCTTAATGGATTGCCAGATGCCAATAATGGATGGGTTCGAGGCAACAAGGAAAATAAGAAAGATAGAAAAGAGCTATGGTAATATTCGCATTCCTATAATTGCATTAACAGCTGACAGTGACAAAATGACCATAGACGCTGGAATGGACTTTCACTTGGTAAAGCCTATCGACAGAAACAAATTTCTTGAAGCCATTCGAGACATCAATGCTAAAAAGCGCTCCATTTAA 2952 0.4041 MNLFRPSSLMLVLVAPLLFQAFERVPHLEQISYIVMEGLSFSYYRDHLQILAMFSNSSSSSTLYYIQHVNQDNGEAYGEPTKYNFSSINTSWISEALEFSYSYAFSNTSSLGTNWSIIIDSGHNPLFLNSARVTRTSVISLGFSETTVTDFLRTQNNDLHQSSMSMSWATKDGRAIVQGIRNTRLVISNDTVLLQLLDQNGNPKGVGDTAIPCKNERFGSSLNIQNTEYMIHCSTIDIMGIESVYVVAIPKNELLSFDQHYKKKGLTLLIVMIFMILIALLSFLSMNARNAKREMRLRASLLKQMEATQQAERKNMNKSLAFAAANHDVRASLAGLTALIDMSFDFVQNASELDTNLKQMKGCTQDLLGLLNSILDTSKIEAGKIQLEEEEFDVSILLEDIVDLYHPMASKKGVDLILDPCDGSIIRYSRVKGDRGRLKQVLCNLLSNAVKFTDEGHIVVRARAQKPSLHNSLMAGSEKHVSCLCFKKISSDEIEGTSNSTQADPYCVMDFIFEVDDTGKGIPKEKYKSVFENYVQVKETSLGVGGTGLGLGIVQSLVRLMHGDIEISEKDVGEKGTCFKFNVVLNVYETITNAASTKEEEEEGVDERNQTQAALPTLQSCSSGSSICSLSPRFRIRSSSPKPAPSRVIMLIADEYRRKATEKFMEGLGIKVAAAKRLEDLFDVLKKMKHKCLYSSSHSSGSQGSEYLSASSHSRSSRVRVALSSMDGKTDIGAASDGFILIVVETDAGPLLELCKIVSNFKRGLCNPCQVVWLDNKILFKNLDKDTLDPKDMVLSKPFHGSRLFQVIKLLPEFGGGKSSSKLNTQESFVDQPSVGSKEIQECEDTEKPLSGKKILVVDDTPLMRMIALRTLIQLGAIIEQCENGEAAVHLVRDGLIKDFPNPPYDYILMDCQMPIMDGFEATRKIRKIEKSYGNIRIPIIALTADSDKMTIDAGMDFHLVKPIDRNKFLEAIRDINAKKRSI* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1173 983 SMART REC_2 853 973 IPR001789 GO:0000160
Ahy19g1173 983 ProSiteProfiles Histidine kinase domain profile. 324 587 IPR005467 -
Ahy19g1173 983 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 585 IPR003594 -
Ahy19g1173 983 ProSiteProfiles Response regulatory domain profile. 854 977 IPR001789 GO:0000160
Ahy19g1173 983 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 305 384 IPR036097 GO:0000155|GO:0007165
Ahy19g1173 983 SMART HKATPase_4 433 587 IPR003594 -
Ahy19g1173 983 Gene3D - 301 384 - -
Ahy19g1173 983 PRINTS Bacterial sensor protein C-terminal signature 511 525 IPR004358 GO:0016310|GO:0016772
Ahy19g1173 983 PRINTS Bacterial sensor protein C-terminal signature 529 539 IPR004358 GO:0016310|GO:0016772
Ahy19g1173 983 PRINTS Bacterial sensor protein C-terminal signature 545 563 IPR004358 GO:0016310|GO:0016772
Ahy19g1173 983 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 372 582 IPR036890 -
Ahy19g1173 983 Gene3D - 835 982 - -
Ahy19g1173 983 SUPERFAMILY CheY-like 849 976 IPR011006 -
Ahy19g1173 983 SMART HisKA_10 317 383 IPR003661 GO:0000155|GO:0007165
Ahy19g1173 983 PANTHER TWO-COMPONENT HISTIDINE KINASE 14 975 - -
Ahy19g1173 983 PANTHER HISTIDINE KINASE CKI1-LIKE 14 975 - -
Ahy19g1173 983 Pfam Response regulator receiver domain 855 974 IPR001789 GO:0000160
Ahy19g1173 983 CDD REC_hyHK_CKI1_RcsC-like 855 973 - -
Ahy19g1173 983 Gene3D - 385 591 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1173 Ahy-Chr19 21960458 21966605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1173 14 980 Histidine Kinase Gene Family AT2G47430 39.544 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy19g1173 HATPase_c 2.60E-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1173 - - ahf:112708949 1743.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1173 19 21960458 21966605 Ahy19g1173 19 21960458 21966605 ECH