Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1159 ATGTCCTTCAATCAATCAAAGACCAATAGAAGCACAGCAGTGTACCGAAAATCTGAGCGATCCACCAGTTTCAATCAGCAACAAGGTTCCTCATTTGCCTACGGCGGTGGCGGCATTAAGCCAACGCCATCGATTCCCTCATCTCCATCACTCTCCTCTAACGAGAGGTTTAACAAGAAGTCTAGCGATGCACAAGTTGGACAATCTAGAGTAAACCCCACCCCACTGAATGTAATAGAGTCTAACAGTGGTTCTGCTGCTCGAAACATACAGAATCGTGCCCATGTGCAACCTCAATTGCATGGAGCATCTGATGCTCCAGCTACTACCAAGCCATGTGAATCATCTGCTGTACAAGGGAGTACTGTAACTATTCCAAAAGTTCCAAGTTCTCAACTGCCCCCTGCAACTTCTGATCCAATTACTCCTGAAACTCCTACTAAGGGAGATGCATCAAAGTCATTCCCTTTCCAATTTGGATCTATTAATCCTAGCATTATGAATGGGATGACAGGCCCTACTAGTATAAGCTCAGCTCTTCCTAATATAGATGAGCAGAAGCAGGATCAGGCTTCAGTGCCAACATCTCTTATTCCAAAACAACAACTATCACCAAGAAAAGATGCAAGTGTCATTGAGCAGTCTATTGGTGGGGAAACTAATATACAAACTAAGGCAAAAAAGGATCTTCGCGTGCCAACTGCAACCTCAGCAAACCAAATGCAGAATCCTTCTATTATTCCTATAACTGGGATTTCAAACTCAACACCATATCACCTGTCACGAGCATCTTTACAGTTTGGTAGTTCTAATCCACATATTCAATCTCAGGGGTTGCCTACAACATCTCTCCAGATGCCTATACAAATGGCTTTGCCAATTGGAAATACTACACAAGTGCAACAACCAATTTTTATTCCAAGTCTTCAACCTCGTCCAATGCAACCTCAGGGGATCATGAATCAAGGTCAAAACATGACTTTTACTCCTCAAATGGGGCATCAGTTGTCACATCAATTAGGCAATGTGGGTATTAGTATGATTCAACAATATCCCCAACATGGACAAAAATATCAACCTGGTCCTCGAAAAACAACTCATGTGAAGATCACTCACCCCGAGACTCATGAAGAGTTGAGACTTGATAAAAGAGCAAATGCATATTCAGATGGGTCATCTAATTCTAGGTCACATCCTAATATCCCTTCTCAATCCCAACCTGGTCAATCTTTTGCAGCTTATCCAATGAATTATTATTCCCCCAACTCTTATAGTACTAATTCTCTCTATTACCATCCTCCCAATCCTCTCCCACTAACAAGTAGCCAAAATACTGCTAATTTGCAACCACAAAGATTTAATTATCCATTGAATCATGGTTCGCAAAATGTTGGTTTCTTGAATTCAATGCAACATAGCTCTCTATTTGCTAATAAAACAGGTGCTTCTATTCTTGGTAGTGTTGAACCCCCAATTTTAGAAAATTTTCATGATATTCCTAATTTAATGTCATTAACTGGAGCTGCTCCTGTGACAATTAGACCATGTGATGCATCTGATGTTGTAGACACATCATTGTCCAATTCTGGTAATTCTGGCGTTCAAAACCGAGAACCCAATATTTCGGTAGCATCACGTGATTCTGGCTCCCCTGCATTACAAAATGTATCTGAAACTAGTCCAGAAATTTCTTCACAGCAATCAAAATTATTTGGTAACTCTTTTGTGCAACAAAAACAATCACCTGGATCTGTTTTTGTATCTATTGAGAAGCTTGCAGCCACTCCCTTGTCACAACCTTCATCAGTAATGACTGAAGATCATGCCTCACTTGTGTCTAGAAGGAAGGAAGCTCTAACTAGGTCAAATTCTTTGAAGGAAAATCCAAAGAAACTAGAGAAGAGCGCCCAATCACATCATCAGGCAGTTTCTATTCAATCTCCATCAATGGATAATGTTGCTTATCAAGCTATTGATAATGATATGCAGTCAGTTGATATTCTGGAGACAACTTCAAATCATGTCAAGAATAGTTCAGATACTTTTTGCAATGACTCTCTGTCTTTTTTGACATCTAGTGCCAACGATAAACCAATTTCAGAACCAAATAAAGTAAAAGCTACATCTAAAGGTAATAAGAAAAGAAGAGAGATTCTTCGAAAAGCTAATGCTGCTGGGTCAACTTCTGATCTTTATAACGCATACAAGGGACCAAAGGAAAAGAAAGAAACTGTTTTCAGTTCAGAAAGCACAAACAATGCTTCTTCATCTGAAAGTTTGAAGCAGGTATCTACAGATGCTGCTCACCTAGATCTTAAAGTGAGTGAGAAATGTCAACAGAGTAAAGTTGAGCCTGATGATTGGGAGGATGCTGCTGACATGTGTACATCAAAACTGGAAGTTGATGACAAATTTCAACTGATTAGTGATGTTAACAGAGGTGTAGCCAAGAGGTACTCTCGAGATTTTCTTTTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGAAGGTTTTCAGATCACAGTTGACATAGCTGAGGCTTTAATGAGTTTTACTATTGTAGATAGGCCTAGTGGAATGCCTTGGATGGATTATTGTGGAACTGGTGTAAATGAGGAAGAGAGGTGGAGTAAATCTTCTAATACTTTTCATTCTGGAAGACGTGGTTTGGATGTTGGTGGAGGTAATGTAGGTTTTCGATCTGGTCCAGGAAACAATTTTGGTGCTTTAAGGAACTTTCGTGGAGAGACACCTATGCAATATGCTGGAGCAGGGGTCCTTTATGGACCAACGCAATCCATGGGAATTCCAAGTGGAATGCAAAGAAACAGTAATGGAGAAAGGTGGCAGCGTTCTGTTAGCTTCCAGCACAAGGGGTTAATTCATTCTCGTACTCCTCAAACTCCTTTACAGACGATGCACAAGGCTGAGAGGAAGTATGAAGTGGGTAAAGTTTCGGATATAGAAGAGGCAAAACAGAGGCAGCTGAAAGCTATCTTGAACAAATTAACTCCTCAGAATTTTGAGAGGCTCTTTGAACAGGTAAAAGTGGTTAATATTGACAATGCTATCACACTTACTGGTGTCATCTCACAAATTTTTGAGAAGGCTTTGATGGAGCCTACCTTTTGTGAAATGTATGCCAACTTCTGTTTACATTTGGCTTCTGAGTTGCCTGATTTCGGTGAGGACAATGAAAAGATAACTTTCAAAAGATTATTATTAAACAAGTGTCAAGAGGAATTTGAGAGAGGTGAAAGAGAGCAAGAAGAAGCAAATAAGGCTGATGAAGGTGAAGTTAAGCTATCTGATGAAGAAAGGGAAGATAGAAGAGTCAAGGCAAGAAGACGCATGCTAGGTAATATTAGATTAATTGGTGAGCTATATAAGAAGAGAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTCGGTCAATATCAGGATCCTGATGAAGAAGATATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGACATGATTGATCATCCCAAAGCCAAAAAACATATGGATGCATACTTCGAAAGGATGAAACTATTGTCAGACAACATGAATTTATCATCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGGGAAAATAAATGGCAACAAAGGAGAAAAATTGAAGGTCCAAAGAAGATTGAGGAAGTGCATAGAGATGCGGTGCAAGAGAGGCAGGCCCAAGCTGGTAGGTTAGGTCGTGGTCCAAGCAACAACCAAACATCAAGAAGAAACCCTATGGACTTTCGTCCAAGAGGATCTCTGGTGTCATCTACAACTGCTCAAATTGGAGTACCGCATGGGTTACCTGGTCAAGTTCGTGGGTTTGGTTCTCAGGATGCTTGTTCTGAAGAGAGGCAATCTTTTGAGGCTAGGACCTTGTCTCCAAGAGCCTTGGGGGATGATTCTATTACCTTGGGACCCCAGGGCAGTTTGGCTAGGGGAATGTCCATTAGAGGATCAACTGCAATAAGTTCATCGATGCCTAATGCAATTCCTACCTCAGTAGACTCTTCCAAAGCAACTGATGTTCTTAACGGTTATGGGAATTTATCAGAGCATGCACCATACCTTACGGACAGGTTTTCAGGTCCAGCTGCTTATGATCAATCAAGTGCTCTAGAGCATAATATAGGCTTAGACAAAAAAGATTTGAGTACTTCATATCGGAGACTTGACAACCTTGTTGCAACTTCACCATCTGATCAATTGCAAGGGTCAATAGTTTCTCAGGTTCCTTCTTCAGAAAAGGTTCGGTCAGAAGAACAACTCCGAGACATGTCCATGGCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAAGGAAGTTGCTCTATGTGTCAAAGAATTAAATTCTCCATGCTTCCATCCTTCCATGGTTTGTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAACGAGACCTTTTGGCCAAATTGCTAGTTCACCTTGTGAAATCACATGATGGTATCTTGAGTCAAGCACAGCTTATCCAAGGGTTTGAGTCTGTTCTCTGTACATTGGAGGATGCTGTTAATGATGCTCCCAAAGCACCAGAGTTTCTTGGACGTGTTTTTGCGAAAGTTATAATAGAGTCTGTTATCTCTTTGAATGAGATTGGGCGGTTATTACGTGATGGAGGGGAGGAACCAGGCAGCCTCTTAGAAACTGGACTTGCAGCTGATGTTCTTGGAAGTACCTTAGAGGTAATAAAATTGGAGAAGGGGGACGCAATTTTACGTGATATCTGTGTTGGCTCTAACTTGCAATTGGAGACTTTCCGTCCACCAAATCCTATAACTTCAATAAAGCTAGAGAGATTTATTTAG 4878 0.408 MSFNQSKTNRSTAVYRKSERSTSFNQQQGSSFAYGGGGIKPTPSIPSSPSLSSNERFNKKSSDAQVGQSRVNPTPLNVIESNSGSAARNIQNRAHVQPQLHGASDAPATTKPCESSAVQGSTVTIPKVPSSQLPPATSDPITPETPTKGDASKSFPFQFGSINPSIMNGMTGPTSISSALPNIDEQKQDQASVPTSLIPKQQLSPRKDASVIEQSIGGETNIQTKAKKDLRVPTATSANQMQNPSIIPITGISNSTPYHLSRASLQFGSSNPHIQSQGLPTTSLQMPIQMALPIGNTTQVQQPIFIPSLQPRPMQPQGIMNQGQNMTFTPQMGHQLSHQLGNVGISMIQQYPQHGQKYQPGPRKTTHVKITHPETHEELRLDKRANAYSDGSSNSRSHPNIPSQSQPGQSFAAYPMNYYSPNSYSTNSLYYHPPNPLPLTSSQNTANLQPQRFNYPLNHGSQNVGFLNSMQHSSLFANKTGASILGSVEPPILENFHDIPNLMSLTGAAPVTIRPCDASDVVDTSLSNSGNSGVQNREPNISVASRDSGSPALQNVSETSPEISSQQSKLFGNSFVQQKQSPGSVFVSIEKLAATPLSQPSSVMTEDHASLVSRRKEALTRSNSLKENPKKLEKSAQSHHQAVSIQSPSMDNVAYQAIDNDMQSVDILETTSNHVKNSSDTFCNDSLSFLTSSANDKPISEPNKVKATSKGNKKRREILRKANAAGSTSDLYNAYKGPKEKKETVFSSESTNNASSSESLKQVSTDAAHLDLKVSEKCQQSKVEPDDWEDAADMCTSKLEVDDKFQLISDVNRGVAKRYSRDFLLKFAEQCTDLPEGFQITVDIAEALMSFTIVDRPSGMPWMDYCGTGVNEEERWSKSSNTFHSGRRGLDVGGGNVGFRSGPGNNFGALRNFRGETPMQYAGAGVLYGPTQSMGIPSGMQRNSNGERWQRSVSFQHKGLIHSRTPQTPLQTMHKAERKYEVGKVSDIEEAKQRQLKAILNKLTPQNFERLFEQVKVVNIDNAITLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFGEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSDEEREDRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGDMIDHPKAKKHMDAYFERMKLLSDNMNLSSRVRFMLKDAIDLRENKWQQRRKIEGPKKIEEVHRDAVQERQAQAGRLGRGPSNNQTSRRNPMDFRPRGSLVSSTTAQIGVPHGLPGQVRGFGSQDACSEERQSFEARTLSPRALGDDSITLGPQGSLARGMSIRGSTAISSSMPNAIPTSVDSSKATDVLNGYGNLSEHAPYLTDRFSGPAAYDQSSALEHNIGLDKKDLSTSYRRLDNLVATSPSDQLQGSIVSQVPSSEKVRSEEQLRDMSMAAIKEYYSARDEKEVALCVKELNSPCFHPSMVCLWVTDSFERKDTERDLLAKLLVHLVKSHDGILSQAQLIQGFESVLCTLEDAVNDAPKAPEFLGRVFAKVIIESVISLNEIGRLLRDGGEEPGSLLETGLAADVLGSTLEVIKLEKGDAILRDICVGSNLQLETFRPPNPITSIKLERFI* 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 1246 1279 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 99 156 - -
Ahy19g1159 1625 Coils Coil 1075 1095 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 1085 1105 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 1 33 - -
Ahy19g1159 1625 SUPERFAMILY ARM repeat 989 1217 IPR016024 -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 387 414 - -
Ahy19g1159 1625 Pfam MIF4G domain 993 1215 IPR003890 GO:0003723|GO:0005515
Ahy19g1159 1625 Gene3D - 993 1228 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 742 762 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 525 564 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 1 85 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 615 637 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 747 762 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 43 85 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 693 723 - -
Ahy19g1159 1625 Pfam MA3 domain 1442 1551 IPR003891 -
Ahy19g1159 1625 SMART if4_15 993 1215 IPR003890 GO:0003723|GO:0005515
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 109 156 - -
Ahy19g1159 1625 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 128 442 IPR045208 GO:0003743
Ahy19g1159 1625 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 692 1615 IPR045208 GO:0003743
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 615 645 - -
Ahy19g1159 1625 ProSiteProfiles MI domain profile. 1437 1561 IPR003891 -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 373 414 - -
Ahy19g1159 1625 SMART ma3_7 1438 1552 IPR003891 -
Ahy19g1159 1625 Gene3D - 1429 1625 - -
Ahy19g1159 1625 MobiDBLite consensus disorder prediction 1226 1281 - -
Ahy19g1159 1625 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 128 442 - -
Ahy19g1159 1625 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 692 1615 - -
Ahy19g1159 1625 SUPERFAMILY ARM repeat 1433 1623 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1159 Ahy-Chr19 21543798 21557450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1159 1 474 Eukaryotic Initiation Factors Gene Family AT3G60240 37.897 2.45e-64 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1159 K03260 - gmx:100798562 1801.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1159 19 21543798 21557450 Ahy19g1159 19 21543798 21557450 ECH
Ahy19g1159 19 21543798 21557450 Ahy9g0904 9 16385075 16398393 hybridization
Ahy19g1159 19 21543798 21557450 Ahy16g2645 16 138207654 138216899 PCT
Ahy19g1159 19 21543798 21557450 Ahy6g2264 6 105486917 105496121 PCT