Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1141 ATGGCAGAATCGCAAGAAGAACATGTTTCAAGCAAGGGTCCTCCTTTATGCACATCACCTTGCCAAAATTCATTAATGGAGGTCGATATAGTTGAACCGTTAGTTTGTGTAGCCTCTAACGTTTCAGAAAATTTACCAGACGAACCAGAATATTTAGCCGGTGATGTCGCAGGCCACGATCACAAGTCGAACAAGGCCACGCAGTTGTCGGATGTTACAGATGTTGAAAGTGAAGAGAAGGAGCTTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTTCTCAGTTACAGATGGCACATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCATTAATCAAGCTATACACTGTAATCGCGACGGGATCCGTGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGCCGTGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACGCACTCACACCCCTGTTCACCGAGAAAGGCAGTGCACTACCATGAGTATAGGCAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGACTGGGATTCGTCCAAATAAGACATTCCTTGCTTTGTCAAATGGGGCTGGTGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATTTAAGAAACTATATAACAGCAAGGCTCCGCAATAGCAACGTGAATGCCGATGTCAGGGAGATGATGAGCTACTTCATGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGAGGAGTGTAAATTTAAGAGTGCAGTATGGGTTGATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAGTTGATAGCACGTACAGTACAAATAGGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAACCACCATGGTAAGTCGACCCTCCTTGGTTGTGCTTTGTTGGGGAATGAAGAAATCGGAAGTTATGAGTGGGTTTTTAGCCAATGGGTGAAGTGCATGGGAACTGCTCCAAAGAATTTGTATGATGACCGACGCATGTGGGTCCCAATATATTTCAAGGGTGAATTTTGGGCATCAATGCGGAGTACGCAAAGGAGTGAGAGCATGCACGCATTCTACGGTGGATACTTATCCAGTAAAACTAGCTTAGTTCAATTTGTTCATGAATATGACAATGTGCTTGGAGTCAAGGAGCAGAGGGAACTGGAGGATGATGCTGCAGACTCGAGGGGGGTCATCCCTTGTGCAACGACCTCGCCTATGGAGAAACAGTTTCAACTAGAGTATACCACGAGCATTTTTAGGGATGTTCAGATTGAGTTTGTGAAGAAGGCTAACTGCAGAGTTTCTGCAATTGATGAACAGGGTCCATTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTAGTCAACGATACTATTCTATGCGTTCCGTACGATGTTCACTTTGACCGTTCCACACAGGAGCTTCGTTGTGAGTGTAATCTCTTTGAGAGTTCAGGTGTGTTGTGCTGTCACTGCCTTGAAGTGTTCCATTCGTATAAAGTGTACAAAGTACCTTCTTGTTATGTTCTTCCTCGATGGAGCAAGAAGATAAAGCGCAAGCATACATATGTCAAAAGTAGCCATGATGTCAGTCGGTCGGATGAGAGTCATGTTGCATTCAGGGGACTGTGTGCACACTTCTACAATGTTGCCCAAGAGTTTGTAGGTGACGATGAAGAAACAGCATTGCTGCATGTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTGCGCACCGTGCCAAAAAGAGGTCCGAGAGCGTGGCAGAGACTCAGACCAACATTGGCTCACAGAGTTCGAACGATGTCAGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTCGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTTACCCCCGGTGGTTCGTCCGCACACACTTGAAGATACAAACCATTGTGCTGTTTCTGGCCTGAATGGTCCCGAACAAGCCGGTGGTTTCCTGTCTTTGTTAAGCTCCTTCAACAAAAAGTGGGATTAG 2223 0.4597 MAESQEEHVSSKGPPLCTSPCQNSLMEVDIVEPLVCVASNVSENLPDEPEYLAGDVAGHDHKSNKATQLSDVTDVESEEKELGDELPDHGNLQEDEIPRVGMRFSQLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKAVQDWVLFKVDLTHSHPCSPRKAVHYHEYRQLTMHAKCVIEDNDETGIRPNKTFLALSNGAGGPSNLGFSEKDLRNYITARLRNSNVNADVREMMSYFMRMKDINPNFFYAVKLDEECKFKSAVWVDARCRASYEYYGDVVSVDSTYSTNRHGLPFVSFVGVNHHGKSTLLGCALLGNEEIGSYEWVFSQWVKCMGTAPKNLYDDRRMWVPIYFKGEFWASMRSTQRSESMHAFYGGYLSSKTSLVQFVHEYDNVLGVKEQRELEDDAADSRGVIPCATTSPMEKQFQLEYTTSIFRDVQIEFVKKANCRVSAIDEQGPLVCVKVEEEKLVNDTILCVPYDVHFDRSTQELRCECNLFESSGVLCCHCLEVFHSYKVYKVPSCYVLPRWSKKIKRKHTYVKSSHDVSRSDESHVAFRGLCAHFYNVAQEFVGDDEETALLHVALEETRAKLAAHRAKKRSESVAETQTNIGSQSSNDVSVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNLPPVVRPHTLEDTNHCAVSGLNGPEQAGGFLSLLSSFNKKWD* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1141 740 MobiDBLite consensus disorder prediction 56 93 - -
Ahy19g1141 740 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Ahy19g1141 740 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 380 637 IPR031052 GO:0006355
Ahy19g1141 740 ProSiteProfiles Zinc finger SWIM-type profile. 520 556 IPR007527 GO:0008270
Ahy19g1141 740 PANTHER OS03G0843700 PROTEIN 78 378 - -
Ahy19g1141 740 Pfam MULE transposase domain 320 377 IPR018289 -
Ahy19g1141 740 MobiDBLite consensus disorder prediction 643 666 - -
Ahy19g1141 740 MobiDBLite consensus disorder prediction 636 706 - -
Ahy19g1141 740 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 378 IPR031052 GO:0006355
Ahy19g1141 740 PANTHER OS03G0843700 PROTEIN 380 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1141 Ahy-Chr19 20743877 20748045 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g1141 FAR1 2.30E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1141 - - aip:107640004 1138.25