Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1131 ATGGCTGGTGAAGGAGATAAAAAGAACGACTTCTATGCGGTTCTGGGATTGAACAAAGAGTGCACTGATTCAGAGCTAAGGAATGCATATAAGAAACTAGCACTGAAATGGCACCCTGATCGTTGTTCAGCGACGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAAGCAATCCAGCAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTGGGAGTCTACGACAGTGATGACGACGAAAACGGCATGGGGGACTTCTTGAATGAAATGGTAACAATGATGAGTCAAACAAACTCAAATGAAAATGGAGAAGAGAGCTTTGAGGAGCTGCAACAGCTGTTTGAAGATATGTTTCAAGATGATATTGGATCAGATAGAAGCACCACTTTTACTACTGCCGGTTGCTCCTCTTCGTCCGCGTGCATGGCTTATAGTGGAAACTCCAACTCGAATAAGCGCAATTCGGCTGAGATGAACTTTTTGAAGGCAGATAATTCCTTTGACTTTGATACCAGTTACCAGAACTTCTGCTTAGGGACAGGGGAAGCACCTCCGAGATATAAAGAGGGAAAAGCTAAAAATAATTCGCGACGGAGGAGGTAG 627 0.437 MAGEGDKKNDFYAVLGLNKECTDSELRNAYKKLALKWHPDRCSATGNSKFVEEAKKKFQAIQQAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTNSNENGEESFEELQQLFEDMFQDDIGSDRSTTFTTAGCSSSSACMAYSGNSNSNKRNSAEMNFLKADNSFDFDTSYQNFCLGTGEAPPRYKEGKAKNNSRRRR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1131 208 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 207 - -
Ahy19g1131 208 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Ahy19g1131 208 CDD DnaJ 10 70 IPR001623 -
Ahy19g1131 208 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Ahy19g1131 208 MobiDBLite consensus disorder prediction 188 208 - -
Ahy19g1131 208 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Ahy19g1131 208 PRINTS DnaJ domain signature 53 73 IPR001623 -
Ahy19g1131 208 PRINTS DnaJ domain signature 30 45 IPR001623 -
Ahy19g1131 208 PRINTS DnaJ domain signature 73 92 IPR001623 -
Ahy19g1131 208 PRINTS DnaJ domain signature 12 30 IPR001623 -
Ahy19g1131 208 Pfam DnaJ domain 10 78 IPR001623 -
Ahy19g1131 208 SMART dnaj_3 9 73 IPR001623 -
Ahy19g1131 208 Gene3D DnaJ domain 6 138 IPR036869 -
Ahy19g1131 208 PANTHER PUTATIVE, EXPRESSED-RELATED 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1131 Ahy-Chr19 20385930 20393068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1131 11 78 C2H2 Transcription Factor Family AT1G74250 44.928 2.38e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1131 - - lja:Lj3g3v2576120.1 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1131 19 20385930 20393068 Ahy19g1131 19 20385930 20393068 ECH