Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1047 ATGACCATGTCACCGGAACAAATGAACATCGTCTTTGGCATACTCATAGTTGGAGCACTCATAATTGCCTTCACATTCTTCAGCTTCACCATGCTTGGATGGTGTAGTCACACTAGTGACATGCCGGCACCACCGGGAATATATTTGGACAACAAGTTCTCCGGCTGCGGCGGCGCGAGCTTGGAGTCGCACTCCATTACCTTCCAGTACAAGGTAGGTGGTTCTGTAGATGGAAGGAACCAAACAGAGTGTGTTATATGCTTGGCGCAGTTCGAAGAAGAAGAGAGTGTTCGGAAGCTTCACAGTTGCAAGCACGTATTCCACACATGTTGCATTGATAGGTGGCTTGGCTCTCATACCGGCTGCCCCTTGTGCCGGAGTCAGATCGACCAAGCCGCCGCTTCCCCAAATGGAAATAACCATATCATCTTGGTTTCTGTTGATTCCTGA 450 0.4933 MTMSPEQMNIVFGILIVGALIIAFTFFSFTMLGWCSHTSDMPAPPGIYLDNKFSGCGGASLESHSITFQYKVGGSVDGRNQTECVICLAQFEEEESVRKLHSCKHVFHTCCIDRWLGSHTGCPLCRSQIDQAAASPNGNNHIILVSVDS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1047 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 135 IPR013083 -
Ahy19g1047 149 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Ahy19g1047 149 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 59 139 IPR044675 -
Ahy19g1047 149 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 59 139 - -
Ahy19g1047 149 Pfam Ring finger domain 83 126 IPR001841 -
Ahy19g1047 149 SUPERFAMILY RING/U-box 79 133 - -
Ahy19g1047 149 SMART ring_2 84 125 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1047 Ahy-Chr19 17100859 17101308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1047 69 132 C3H Transcription Factor Family AT4G33565 56.923 1.22e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1047 - - adu:107464721 315.079