Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1042 ATGGCACATGCATCTTTTTCCCGAGTATCTCAGATGGCATATGTTATATTTGTGTGTCTCTTGCTTATTCTGAAACCGAAGGGTGTGGCTTCTTCTTCCGAAAATGCCCTTAAGATAAAGTATGATGTCTTTGTTAGCTTCAGAGGCCCGGACATCCGACGAGGTTTCCTTAGTCATTTGGTTGACGCGCTTTCTAGAAAGAAAATTAACGGCTTTGTAGATGATAAAATTGAGGTAGGAGATGAAATACCAAAATCACTGATTAGAGCAATCAAGGCATCATTAATTTCACTAGTTATATTTTCACCAAACTATTCTTCTTCACGCTGGTGTTTGGAGGAACTTGCAAAAATAGTTGAGTGCAGAGAAAAAGAAGGCCAGTTTGTGCTACCAGTTTTTCTTGACGTAGATCCCTCAGATGTGCGGCATCAAAGAGGATCCTACGGAGACGCATTTATTAAACATGAGAAGAAATATGACTTGGTCAAGGTTCAACGTTGGAGAACTGCTTTACAAAGAGCTGCTAATTTATCTGGATTACATTCAACAAAATACAGGAATGACTATGGGCTCCTTGAAGCAATCATCAAACATCTGATAAAGAGATTGAATCATGAGCAGAAATATATCTCAAGAGGGCTTATTGGAATTGGCAAATCAATTGCACTCTTAGAGTCAGAATTGAATCCGGAGTTAGGAGACGTGCGTGCTTTGGGAATTTGGGGAATGGGGGGCTTGGGTAAGACAACTCTTGCATGGGAAGTGTTTAACAGCGTAAACTCACAGTACGAAGGTTCTTGTTTTCTGGGAAATGTAAGGGAAAGTTCAGCCAGGGAAGGAATATTTTCTTTGAAGAGCAAACTTTATTCTGAACTCATAGGTGAACCAGACTTAAAAATTGATAGCTCAAATGGATTGCCCCCTTTTCTTGAGAAAAGACTTGGTCGAATGAAGGTAATCATTGTTCTAGACGATGTCAATGATTTTCGGCAACTGAAAATACTATTTGGAACAAGGGAACAATTTGGACCAGGTAGTAGAATCATTGTAACATCCAGAGATAAGCAAGTGCTCCATACAGAAGTTGATTTTATCTACGAAGTTAAGCCATTACAAGTTGATGAGGCGCTTCGACTTTTCAATTCGATTGCCTTCAAACATGAACATCGTGATCTTGAGATGGAATTTCATGAGCAATCAAAAAAGGTGATCGAGTATGCCAAAGGTGTTCCATTAGTCCTTGAAGTTCTGGGACACCATGTCCATGGAAAAGGGAAAGAAATATGGGAAAGCCTGTTAGAGAAGCTTAAAAATATGCCAGACAAAGAGGTCCATAATGTGATGAAACTCAGTTATGATGATCTTGATCGCCATGAGAAAAAGATATTCTTGGATATTGCTTGTTTTTTTAAATGGTTACATGTGACAGAGGATTATATAAAACTACTTTTGAAGGATGAGATCAATTCTGTGGCTTTTGTGTTAGAAAGGTTAAAAGATAAAGCCCTCATAACTGTTTCTGAAAGAACTATTGTATCGATGCATGACATTATTCAAGAAACAGCATACGAGATTGTTCGTCAAGAATCTATTGAAGACCCTGGAAAACGAAGCCGATTATGGGGTTCTAATGACATTTATCAAGTGCTAAGAGGTGATAAGGGGAGTGAAGCCATTAGAAGCATCTCCGCCAAGTTGCCATTGCTTAATAAGAAGCTGCAGCTAAGCCCTCAAGTATTTGCAAAGATGAGCAACCTACACTTTTTGGAACTTTTAGCTCCTTACACGTGTCCTTCTTATTTCCCACAAGATCAGATGAGTTTGTATTTTCCTGAAGGGCTTGAGTCTTTGCCTAATGAACTAAGGTTTCTTCTTTGGATGCACTACCCTATGGAAGCCTTGCCAACTCAGTTTTCGGCTGAAAATCTTCAAATACTCTCCTTGCCCGTTAACCGAGTGAAAAAACTTTGGCATCAAGAGCAGTGTTACAGAATCTTCGAAGTTTAA 2007 0.3916 MAHASFSRVSQMAYVIFVCLLLILKPKGVASSSENALKIKYDVFVSFRGPDIRRGFLSHLVDALSRKKINGFVDDKIEVGDEIPKSLIRAIKASLISLVIFSPNYSSSRWCLEELAKIVECREKEGQFVLPVFLDVDPSDVRHQRGSYGDAFIKHEKKYDLVKVQRWRTALQRAANLSGLHSTKYRNDYGLLEAIIKHLIKRLNHEQKYISRGLIGIGKSIALLESELNPELGDVRALGIWGMGGLGKTTLAWEVFNSVNSQYEGSCFLGNVRESSAREGIFSLKSKLYSELIGEPDLKIDSSNGLPPFLEKRLGRMKVIIVLDDVNDFRQLKILFGTREQFGPGSRIIVTSRDKQVLHTEVDFIYEVKPLQVDEALRLFNSIAFKHEHRDLEMEFHEQSKKVIEYAKGVPLVLEVLGHHVHGKGKEIWESLLEKLKNMPDKEVHNVMKLSYDDLDRHEKKIFLDIACFFKWLHVTEDYIKLLLKDEINSVAFVLERLKDKALITVSERTIVSMHDIIQETAYEIVRQESIEDPGKRSRLWGSNDIYQVLRGDKGSEAIRSISAKLPLLNKKLQLSPQVFAKMSNLHFLELLAPYTCPSYFPQDQMSLYFPEGLESLPNELRFLLWMHYPMEALPTQFSAENLQILSLPVNRVKKLWHQEQCYRIFEV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1042 668 Pfam TIR domain 40 208 IPR000157 GO:0007165
Ahy19g1042 668 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 661 IPR044974 GO:0006952
Ahy19g1042 668 ProSiteProfiles TIR domain profile. 39 203 IPR000157 GO:0007165
Ahy19g1042 668 Gene3D - 219 365 IPR027417 -
Ahy19g1042 668 SUPERFAMILY "Winged helix" DNA-binding domain 443 550 IPR036390 -
Ahy19g1042 668 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 179 IPR035897 -
Ahy19g1042 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 466 IPR027417 -
Ahy19g1042 668 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 29 661 - -
Ahy19g1042 668 PRINTS Disease resistance protein signature 237 252 - -
Ahy19g1042 668 PRINTS Disease resistance protein signature 313 327 - -
Ahy19g1042 668 PRINTS Disease resistance protein signature 407 421 - -
Ahy19g1042 668 Gene3D - 371 456 IPR042197 -
Ahy19g1042 668 Pfam NB-ARC domain 236 453 IPR002182 GO:0043531
Ahy19g1042 668 Gene3D - 38 211 IPR035897 -
Ahy19g1042 668 SMART till_3 40 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1042 Ahy-Chr19 17000893 17011062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1042 41 657 WRKY Transcription Factor Family AT4G12020 32.853 9.09e-87 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1042 - - ahf:112779922 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1042 19 17000893 17011062 Ahy9g0798 9 12864635 12878983 hybridization