Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1038 ATGTTGGGAATGAATAACCGTGTTGATCTGGTGGAGAAAATCACTCCGTGGAGAGAATCATGGAAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCACAAGAATCCTGCTTTGGATCCTTCTCAAAATCTGTTGCATATGGTGTTAATGGATGAGAAGTTACACAAGATCCAAGCAACCATTAGAGATAAGCTTATACCAAATTTTGCTGTGTCTCTAACTGAGGGAGAGGTGTACTTGATGACCCATTTTACGGTTGTACCAAACACTGGTTTGAACAGAGCGGTGAAACATCGGTTCAGACTTTTGTTCCAATACAAGACCTCTGTTGTTTCTGTGGTATCTATAAGGATACCTCATTCGGGTTTGTGTTTTACATCAATAGATGAAATTGATCAAAGGACAAAGGACGACGATTTCCTCATTGATTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGCAAGATGATCAAAGCAGTTGTGCTCGAAGTTTTTTCTGATGGCAAAAAGGTACAATGCAATGTGTTTGGAAATGCTTGTGATCTGTTGGAATATGATAACTTACAAAAATATCCAAGATCTCTGCTGATTGTTCTCGAGTCTTTTAAAATCAAAGCAATTGAAGGTGGGGTAATGCTGCAGAATGTGATGAATGTCTCTAGGTTATTCATTAATCCTGACATTCCTGAGTCTGTTGAGTTCCTGAGTAGATTTAGTGTTGCCAGTTATGGGTTCTCAAGACTTGTGACCAATGAGCTTGGATACTTAGTTTCTAAAGTTGATGGTGATTTTTTCAATCCCAAGGAGATCAGTAATATTCAAGATCTTTGTGCAGATAACGGGGATGGTCATTACTTCGTTATTGGGACAATTAAGGAAGTTATGGATGAACCAGATTGGTGGTACTACTCATGTGTATGTGGTCATGTTGTTGTCGAGCATGAGGATCTCTACCTTTTTGATGCTTGTGGTTCATGTATTGAACATGTTATGGTCAAATTCTTCTTGAAGATTGTAGTGTCTCATGCAAATGGCAACAATATATTTGTTCTTAAAGATCGTGAGGTCGTGCAAATAATAAAGACAAGATGCTCGAGTTTTTTGGATAATCACCCAGAGTTGAATCAGGGATCTTATTGCAAAGTTGTTCCATTGAAACTCATATCAAGTCTTTTGCACAAAAAAGTTGTATTCATGGTTGATGCTAGGCCTGTGGGTTATGAGATGAATCGATCTGTGTATATTGTTCAACAAATTTGGGATGATGCCTCTGTTATTAATGTTTTTGAGGTTGCTGCTGAGATGAATGAGCATAAGATTCATGTTCTGGTTGATTCTATTCCTGAAGTTGAAGATGCTTTCAGCTAA 1389 0.3801 MLGMNNRVDLVEKITPWRESWKVHVKVVKLWYHKNPALDPSQNLLHMVLMDEKLHKIQATIRDKLIPNFAVSLTEGEVYLMTHFTVVPNTGLNRAVKHRFRLLFQYKTSVVSVVSIRIPHSGLCFTSIDEIDQRTKDDDFLIDFVGIITGVRKERDVASYGKMIKAVVLEVFSDGKKVQCNVFGNACDLLEYDNLQKYPRSLLIVLESFKIKAIEGGVMLQNVMNVSRLFINPDIPESVEFLSRFSVASYGFSRLVTNELGYLVSKVDGDFFNPKEISNIQDLCADNGDGHYFVIGTIKEVMDEPDWWYYSCVCGHVVVEHEDLYLFDACGSCIEHVMVKFFLKIVVSHANGNNIFVLKDREVVQIIKTRCSSFLDNHPELNQGSYCKVVPLKLISSLLHKKVVFMVDARPVGYEMNRSVYIVQQIWDDASVINVFEVAAEMNEHKIHVLVDSIPEVEDAFS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1038 462 SUPERFAMILY Nucleic acid-binding proteins 125 247 IPR012340 -
Ahy19g1038 462 Pfam Domain of unknown function DUF223 47 131 IPR003871 -
Ahy19g1038 462 Gene3D - 268 435 IPR012340 -
Ahy19g1038 462 Gene3D - 117 251 IPR012340 -
Ahy19g1038 462 Gene3D - 10 114 IPR012340 -
Ahy19g1038 462 SUPERFAMILY Nucleic acid-binding proteins 10 114 IPR012340 -
Ahy19g1038 462 SUPERFAMILY Nucleic acid-binding proteins 274 411 IPR012340 -
Ahy19g1038 462 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1038 Ahy-Chr19 16944924 16949707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g1038 7 254 Core DNA Replication Machinery Family AT2G06510 20.532 5.94e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1038 - - aip:107615091 709.138