Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1006 ATGTCCCTGAAGAAAGGCAAAAATGACGACAGGAGGAGTGCTCAGCTCAAAGGAAAAGTGAAGCCGAGTAGCCCCTCAGCAAGCTGGCTTAAAGTGACGGTGGCCTTCGACTTGTGGATCGGTGATAACGGCGGAGGTTGGAATGGAAGTGGAGGCTGTGAGGATGTTGGAAGCATGTTGGATAGTAGATGTGGTGGTAAAGTAAGGGTTTTTGATATAATAATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGTGGACAACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGAATGCATTCCACATAATGGCAGCTGGTAGCATAATGTTTGTCTTCTTATTTCAGGACACAATGTATGATACCAGAGTGGAGGAAGATGCTGAGTCATCCGATTGGGAAGGTAGGGGGGCTTCAATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCGAGCTGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCTAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGCTGTAACCCGATGTGGATGTTTGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGAGAGATTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGAAGATTATGCGATATTCGGCGATGTGCTAGCATTCGACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCTGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTGTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGGATGGCGACCCGGCCATGCGTATAGCAATCCGCACCGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCTAACATAAGCGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTCAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTTGTGGTAGATTTTTTGCTGGAGTACGGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTATGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTCTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTTGTGTTAGAATATGTGAATTTGATGACAGTGACAACCCTCATGCATATACTCTTCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTACTTGCAGCTGCATGCGCATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTAGAGATACATAACCAATGTGGTGAGCAACACACTGCTGAACCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGCAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGGTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGCTTAAGACCATTAACGGATAATATGACAACAGCAAATGACTGCGGGGTGAAGGACCCCATTCGTGTCAGGACAAAAGGCACGGCTCGGATGAGTCAAGCAGGCGGTTCTGCGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCAACGGAGGCGCGCAACCTTCAACGAGGAACAAAGAATCACTTGCTGGGAGAAATAAACGCAAGCGAACGAAGGCACCCGTCGTTGTCCCAGATAATTGTCCGCCTGAAAATGCATGTCAAGCTGGATGCGACTTATGGGAACAATTTTCGCTTGCAGACCCCTGA 2559 0.4787 MSLKKGKNDDRRSAQLKGKVKPSSPSASWLKVTVAFDLWIGDNGGGWNGSGGCEDVGSMLDSRCGGKVRVFDIIMASSSKFCKDACMWNEPLVDNWMEGNAGVSNPQNAFHIMAAGSIMFVFLFQDTMYDTRVEEDAESSDWEGRGASMLPVFLGLDGLRAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKAVTRCGCLAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDEDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRHCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYICGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTMFTREMFLRYRDSLKRCVCVRICEFDDSDNPHAYTLQKYRRPEMNWKVYRDHISNRFTCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKLEIHNQCGEQHTAEPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKVYSNKLMSDALFLEIKYGLRPLTDNMTTANDCGVKDPIRVRTKGTARMSQAGGSAPKTKRKCSTCGKLGHRRTRCPNGGAQPSTRNKESLAGRNKRKRTKAPVVVPDNCPPENACQAGCDLWEQFSLADP* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1006 852 PANTHER OS02G0262500 PROTEIN 163 324 - -
Ahy19g1006 852 MobiDBLite consensus disorder prediction 1 25 - -
Ahy19g1006 852 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 339 695 IPR031052 GO:0006355
Ahy19g1006 852 ProSiteProfiles Zinc finger SWIM-type profile. 626 659 IPR007527 GO:0008270
Ahy19g1006 852 ProSiteProfiles Zinc finger CCHC-type profile. 782 799 IPR001878 GO:0003676|GO:0008270
Ahy19g1006 852 Pfam MULE transposase domain 346 440 IPR018289 -
Ahy19g1006 852 PANTHER OS02G0262500 PROTEIN 339 695 - -
Ahy19g1006 852 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 163 324 IPR031052 GO:0006355
Ahy19g1006 852 SMART 26again6 634 661 IPR006564 GO:0008270
Ahy19g1006 852 Pfam FAR1 DNA-binding domain 178 267 IPR004330 -
Ahy19g1006 852 MobiDBLite consensus disorder prediction 1 17 - -
Ahy19g1006 852 MobiDBLite consensus disorder prediction 765 825 - -
Ahy19g1006 852 SUPERFAMILY Retrovirus zinc finger-like domains 764 801 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1006 Ahy-Chr19 16076946 16081380 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g1006 MULE 9.50E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1006 - - aip:107611673 1436.4