LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g0994	ATGAGGATCCGGAAGAGACAAGTGCCTTTTCCTCTCTCTCAGGTGTCTCCAGATCCCAACCGGATCAGCCGGTCACCGGTCATGGTGCAACTCAACCAAGCTGCCCCTGCCGACGTAGCCACGTCCTCGAAACGTTCTTGCACTGACGTTTCGGCTGCTGCGCCGGCACACAGCTTGGATCCATCTCAGCCGTCTGATCAGACGCTACACCCACCGATCGGTGAGGATGGAGAGCTTGCGAGGCTGCAGCGGAAGAAGAAGGAGGAATATCTGGTAGAAGATGAAGATGGGAAGACACAAGAGGAGGGAGAAGGGGGACAAAAGGGTAATGATACCAGGAAAGCATGCAATATGGGTTCCGAAACACCACCTGATGCCCTCTCACCCTCAAGCACCACTTGTAAACAAGATTTGAGATGGCGCGAGGTAGAGAAGGCAATTCCGCTAAAGAAAAGAAGAGGAGATCAGTTTGATAATAACATGGAAGGAAATATTAGCGACAGCAACAGAAAGAAGACGAACAAAATCCAGAGTCGTAGCAGCAGAACGAAGATGAACATGGCATGGGAGCAAGATGATGACGAAATTATCAAAGAGGAAGAAAAAGAAGCCGAGGAAGAAGTAGTAGCAGTAGATGAAGAAGAAGAAGAAGAAGTAAGAGAAAGAATCCAAACGAAAAAGGTTAGTAAGAAGAAGAGGGTAAGGGGTGGTGCACTGATGGAAGGTTCTAGATGCAGCCGCGTTAATGGGAGAGGATGGAGGTGTTGTCAGCCAACATTAGTTGGTTACTCACTTTGCGAGCATCATTTAGGAAAAGGAAGGTTGAGAAGCATGACAAGTGTTAGAAGCCGCTCTATTGCTACTCCAACCACTGCTGGTGCACCCAAGAAGCTTCACCGCCAGTTAGTTCCACCATCTCATAATGAAGCTGCTAATTCGTCTTCTTCGTATTCGAACAACAATGCAAAAGAAACCAATTGTGTCGTCGCTCGCCATGATGATGACGGTTATGCTAACCACCACGCTGGAGGCGGTGGCCAAGACGACCATGACGATGAGAAGAAGCCGGTGACGGTTACCACCAAGAAGAGGGTGAAGCTTGGAACGGTTAAGGCAAGATCGATAAGCAGCTTGCTGGGACAAACAAACAACGAAATTACTATGCCTGACAACAACAACAATAATAATAATAATGTGAACTGA	1203	0.4788	MRIRKRQVPFPLSQVSPDPNRISRSPVMVQLNQAAPADVATSSKRSCTDVSAAAPAHSLDPSQPSDQTLHPPIGEDGELARLQRKKKEEYLVEDEDGKTQEEGEGGQKGNDTRKACNMGSETPPDALSPSSTTCKQDLRWREVEKAIPLKKRRGDQFDNNMEGNISDSNRKKTNKIQSRSSRTKMNMAWEQDDDEIIKEEEKEAEEEVVAVDEEEEEEVRERIQTKKVSKKKRVRGGALMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMTSVRSRSIATPTTAGAPKKLHRQLVPPSHNEAANSSSSYSNNNAKETNCVVARHDDDGYANHHAGGGGQDDHDDEKKPVTVTTKKRVKLGTVKARSISSLLGQTNNEITMPDNNNNNNNNVN*	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g0994	400	ProSiteProfiles	WRC domain profile.	239	283	IPR014977	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	13	49	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	154	184	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	77	94	-	-
	Ahy19g0994	400	Coils	Coil	197	221	-	-
	Ahy19g0994	400	PANTHER	OS02G0773600 PROTEIN	30	395	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	334	359	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	280	321	-	-
	Ahy19g0994	400	PANTHER	-	30	395	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	381	400	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	113	136	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	1	140	-	-
	Ahy19g0994	400	MobiDBLite	consensus disorder prediction	306	321	-	-
	Ahy19g0994	400	Pfam	WRC	241	281	IPR014977	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g0994	Ahy-Chr19	15860076	15862980	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g0994	-		-	adu:107464773	640.958

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy16g0328	16	6821187	6823270	Ahy19g0994	19	15860076	15862980	PCT
	Ahy6g1004	6	13174412	13176523	Ahy19g0994	19	15860076	15862980	PCT
	Ahy19g0994	19	15860076	15862980	Ahy16g0328	16	6821187	6823270	PCT
	Ahy19g0994	19	15860076	15862980	Ahy6g1004	6	13174412	13176523	PCT