Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0993 ATGTACTTTTCTTTGTTACTTAAACATCAATTCTTACCAATCATCATCATCATAATAAGTATTATCACCCTCACCAAAGTTGGTTGCTTCGAGTTCAATTTCCCTACATTCCAACCACAAGATGAATCTCATTTACTGCTAAGCAAATACTCAGAAATCTACCTAGATGCCATCCAAGTAACCCCTGATATCCGTGGCGAAATACGCCATTATTCAGGACGGACATTCCACAATAAACCATTCAGATTATGGAGCAAGAACAAGAAACAAATTGCAAGTTTCAACACCACTTTTGTTCTTAACATCAATCCTCAAACTTCCCCTGGTGGAGAGGGCTTGGCCTTCATCTTAACCGCAAACACCGCTCTCCCGGACGACAGTTCGGGAGAGTGGCTGGGAATTGTGAACGCCACAACTAATGGAACTTCTCAAGCTGGGGTTCTTGCTGTGGAATTTGACACAAGAAAAAGTTTTGCAGAAGATGGCCCTGATAACCACGTTGGTATTAACATAAACAGTGTCTACTCCATCAAACAGGAACCATTGTTAATCAAAGGGATTAATATTTCATCAGGTATTAATGTAACTATAACAATTCAGTATGATAATGATGTTATATCCGTGTTTGGTTCCATGAGTACAAGAACTTCGCCAATGGAGACGCTTTTGGTATCTCCACCACTTAATCTTTCTTCCTATCTTCAGGAAGAGGTTTACGTCGGATTCTCTGCTTCAACGAGTAACTACACTGAGTTGAATTGTGTTAGAGCATGGGAGTTCAGCGGTGTAGATATCATTCATGATGACAAGAACCTGTTGTGGATTTGGATAACTGGTACAACCGTTATTGTTATTATGATTGGTGGTGTTGTGTTTCTCCTAAATTGGCGAAGGAATCATGGTGTGGGAGCTTCAGGAGATGCATACCCGAGGATAGAGGATCAGATTCAACATTCATCCATGGCTCCAAAGAAGTTCCGGTTAAAGGAAATTAGAAAAGCAACGGGCGGATTCAGCCTTCAAAACAAGCTTGGTGAAGGTGGTTTTGGAACAGTTTATAAAGGGCTACTCGAAAACAAGGAGATAGCTGTAAAGAGTCACTCGAAGCATTCGCGCCAAGGGAAGCAAGAATTCATAGCCGAAGTCACAACAATCGGAAGCCTCCACCACAAGAATTTGGTCAAACTTATTGGTTGGTGCTATGAAAAAGGAGAGCTCCTTCTTATTTATGATTACATGCCTAATGGAAGCCTAGACAAGTACCTATTCGATAAGAAAAACAATTTTGGCAATGAATTTGGGGAAGGATTTAACAATTCATCAACACTAAATTGGGAAACTAGGCAGAGAGTGATATATGGTGTGGCTCAAGCATTGGACTATCTCCACAATGGTTGTGAGAAAAGGGTGATTCATAGGGACATCAAGGCCAGCAACATAATGTTAGATTCGGAATTCAATGCCAAGTTAGGAGATTTCGGATTGGCGCGAACCATTCAGAAGAGAAATGAAACTCACCATTCCACAAAGGAGATTGCAGGGACGCCAGGGTACATGTCCCCGGAAACATTCCTCACCGGAAGGGCGACGGTGGAAACCGATGTGTACGCGTTCGGCGTTCTTGTGTTGGAAGTAGTGTGCGGAAGAAGGCCAGGGAATGTGAACGGACAGGATGATTACAAGAACAGCATTGTGTATTGGGTTTGGGAGCTTCACGGAGAGGGGAGAATAGTGAGTGCTGTGGACAAAAAGATAAGTAAAGAAGAGATGAAGGATGAAGAAGCTTCTAGAGTTCTTGTTTTGGGGTTGGCTTGTTGCCATCCAAACCCGCACCATAGGCCTTCAATGAGAACTGTTCTGCAAGTTCTGAACGGGGAAGCACCGCCGCCAGTGGTTCCTCAACAAAGGCCTGCTTTTGTGTGGCCTGCTGTGCCTCCATCTTTCAATAAAGGTGAAGATACTTATTCAGTCCTCAATGGACAAGTCACTCCCATATTCACTGATATCACTGGTAGGTGA 2019 0.4299 MYFSLLLKHQFLPIIIIIISIITLTKVGCFEFNFPTFQPQDESHLLLSKYSEIYLDAIQVTPDIRGEIRHYSGRTFHNKPFRLWSKNKKQIASFNTTFVLNINPQTSPGGEGLAFILTANTALPDDSSGEWLGIVNATTNGTSQAGVLAVEFDTRKSFAEDGPDNHVGININSVYSIKQEPLLIKGINISSGINVTITIQYDNDVISVFGSMSTRTSPMETLLVSPPLNLSSYLQEEVYVGFSASTSNYTELNCVRAWEFSGVDIIHDDKNLLWIWITGTTVIVIMIGGVVFLLNWRRNHGVGASGDAYPRIEDQIQHSSMAPKKFRLKEIRKATGGFSLQNKLGEGGFGTVYKGLLENKEIAVKSHSKHSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYEKGELLLIYDYMPNGSLDKYLFDKKNNFGNEFGEGFNNSSTLNWETRQRVIYGVAQALDYLHNGCEKRVIHRDIKASNIMLDSEFNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMSPETFLTGRATVETDVYAFGVLVLEVVCGRRPGNVNGQDDYKNSIVYWVWELHGEGRIVSAVDKKISKEEMKDEEASRVLVLGLACCHPNPHHRPSMRTVLQVLNGEAPPPVVPQQRPAFVWPAVPPSFNKGEDTYSVLNGQVTPIFTDITGR* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0993 672 ProSitePatterns Protein kinases ATP-binding region signature. 344 365 IPR017441 GO:0005524
Ahy19g0993 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Ahy19g0993 672 CDD lectin_legume_LecRK_Arcelin_ConA 30 261 IPR001220 GO:0030246
Ahy19g0993 672 SMART serkin_6 338 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0993 672 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 15 653 - -
Ahy19g0993 672 SUPERFAMILY Protein kinase-like (PK-like) 319 623 IPR011009 -
Ahy19g0993 672 ProSiteProfiles Protein kinase domain profile. 338 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0993 672 Gene3D Transferase(Phosphotransferase) domain 1 413 628 - -
Ahy19g0993 672 Gene3D - 29 271 - -
Ahy19g0993 672 CDD STKc_IRAK 344 625 - -
Ahy19g0993 672 Pfam Legume lectin domain 31 263 IPR001220 GO:0030246
Ahy19g0993 672 Gene3D Phosphorylase Kinase; domain 1 323 412 - -
Ahy19g0993 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 261 IPR013320 -
Ahy19g0993 672 Pfam Protein tyrosine and serine/threonine kinase 339 622 IPR001245 GO:0004672|GO:0006468
Ahy19g0993 672 PANTHER - 15 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0993 Ahy-Chr19 15815697 15817964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0993 72 639 Receptor kinase-like Gene Family AT5G55830 37.948 2.79e-122 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy19g0993 PK_Tyr_Ser-Thr 8.40E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0993 - - gmx:100785031 993.801