Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0977 ATGGGATCGACTAGCAAGCTTGGTGAGCAGCCGTGTATGTGGAATGAGCCTCTTGAGGATGACTGGATGGATGGCAATGTTTGTGTTACGAATCAACAGGAGACAATGTTTGATACCGTAGTGGAGGCAGATGGTGACTTATCTGATTGGGAAGGTAGGGGGGCTTCGCTGTTGCCCAATTTCTTGGGTTTGGAGGGGTTGCAAGCTGAAGATGTCCTTCAAATGGAGTTTTCTACACCTGAGGATGCAAGCGGATTTCGAGGGAAAAAATGGTTGGAAAAGGTTGATCGCATTCGGGAACATAAGGTAGTTACCCGATGCGGATGTCTTGCCGAGATGAGGATTAAGAGGAAAGACGGAAGCGGGAAGTGGTACGTGTCGCGTTTCGTCGAGGAGCATAATCACGAACTGGCATATGAGAAGCTTGTGGATTATTTACGGTCACACAGGAAGATTTCTGAGCAAGATATGTATAACGAGGTGCGGAAGCAGAGAGGGCTCCAAGGTGGAGACGTAAATGCAAGTATAAGGTACCTAGAAGGTCTGGCACGCGTGGATGGGAAAATGTTTTGGCGGTACAAGGTTGGAGACGGGAAACACCTCTGCAACTTGTTTTGGAGCAACGGTCGTTGTCAGAAAGATTATTTGTTGTTCGGTGACGTCCTAGCATTCGATGCAACGTATGGCCGTAACAAGTATAACCTTCCCGTTGTTGTCTTCTCCGGAGTAAACCACCACAACCAGACATGCGTTTTTGCTACAGCTATGGTTTCCTGCGAGTCACATGAGTCTTACATTTGGGTTCTTGAGAAGTTTTTGGAATGCATGCAAGGAAAGGCACCACAGTCTGTTATCACCGATGGGGACCCAGCCATGAGGATAGCGATTCAGTCTGTTTTTCCTGATGCGCATCATAGGTTATGCGCTTGGCATCTTCTGAGAAACGCGACGTCTAACATATGCGACCCAAGATTCACACATCTCTTTAAACACTGCATGTTGGCTGATATGGAAACCGATGAGTTTGAAGCGCATTGGGAGAACATGGTGAACGAGTGTGGTGTTGGGGACGTTGACTGGGTGAAGGACTTGTACAGTAAAAAGTATGCATGGACAACAACTTACATCCGAGGTAGATTTTTTGCCGGGATACGTACTACATCTAGGTGCGAGTCACTACACGCCAAGCTCGGTCAGTTTGTTAAGAGCCGGTACGGTATTCTGGAATTTGTTACCAATTTCCAGAGGTGTGTCGATTTTCTTCGCGACAACATTGATGAGCTAGAATTTCGCTCTTGGTATGGTACACCTGTATTACAGACGGAGTTTGTTGAGTTGGAAAAGTCGGCGTGGACGAAGTTCACTCGCGAAATGTTTGCTAGATTTAGGGAAAGCTTGAAACGGTGCGTACGTGTTAGAATATGCGAAATCAATGAGACATTGCACCTGCATGTGTATACTCTACAAAAGTATCGGAGGCCTGAGATGACTTGGCAGGTTTATAGGGAGCCTACTTCTAATATCTTTAGTTGCACGTGCATGCGAATGGAGTCGTTCGGAATTCCATGTGTGCACATTGTGGCTGTGTGTGTCAGGCTTGATTTAGCGGAAATTCCTGAAAGCCTGGTTCTGCGCAGGTGGTCCAAGACAGCTAAAATGGAGATAAATAATAAAATGGTTGACCACCACACTGCTGACCAAAGCGTGACGTATAGAACAAGGTTGGGTGCGTTCTCGCAGCTATGCAAACGGTTAGGGAAGGTGGCTTGCATGAGCGATGATGACTTCAAGGTTTACTCGAAGAAGGTTTTATCCGATGCTGTTTTCCTTGAAATCAAGTATGGCCTTCGACCACCAAACAATATTTCCACACCGGCAACAGATAATATAGTGAAAGACCCAATTCGTGTTAGAACAAAAGGCACAGGTCCGTGCAGTCAAGCTGGGGGTTCTGCTGCGAAGACCAAAAGAAAGTGCAGTACGTGTGGGAAGCTCGGGCACCGGAGGACACGCTGTCCTAACAGAGATACGCCAACTGCAACAACAAATGTGACTGCCACTGCTCGGGGGCATAAACGCAAGCGATCAAAGGGTCTTATGTCATTGGTGTTTCGCATTAGCACTTGA 2127 0.4701 MGSTSKLGEQPCMWNEPLEDDWMDGNVCVTNQQETMFDTVVEADGDLSDWEGRGASLLPNFLGLEGLQAEDVLQMEFSTPEDASGFRGKKWLEKVDRIREHKVVTRCGCLAEMRIKRKDGSGKWYVSRFVEEHNHELAYEKLVDYLRSHRKISEQDMYNEVRKQRGLQGGDVNASIRYLEGLARVDGKMFWRYKVGDGKHLCNLFWSNGRCQKDYLLFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFATAMVSCESHESYIWVLEKFLECMQGKAPQSVITDGDPAMRIAIQSVFPDAHHRLCAWHLLRNATSNICDPRFTHLFKHCMLADMETDEFEAHWENMVNECGVGDVDWVKDLYSKKYAWTTTYIRGRFFAGIRTTSRCESLHAKLGQFVKSRYGILEFVTNFQRCVDFLRDNIDELEFRSWYGTPVLQTEFVELEKSAWTKFTREMFARFRESLKRCVRVRICEINETLHLHVYTLQKYRRPEMTWQVYREPTSNIFSCTCMRMESFGIPCVHIVAVCVRLDLAEIPESLVLRRWSKTAKMEINNKMVDHHTADQSVTYRTRLGAFSQLCKRLGKVACMSDDDFKVYSKKVLSDAVFLEIKYGLRPPNNISTPATDNIVKDPIRVRTKGTGPCSQAGGSAAKTKRKCSTCGKLGHRRTRCPNRDTPTATTNVTATARGHKRKRSKGLMSLVFRIST* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0977 708 PANTHER OS02G0262500 PROTEIN 88 156 - -
Ahy19g0977 708 PANTHER OS02G0262500 PROTEIN 163 573 - -
Ahy19g0977 708 Pfam FAR1 DNA-binding domain 88 138 IPR004330 -
Ahy19g0977 708 SMART 26again6 509 536 IPR006564 GO:0008270
Ahy19g0977 708 SUPERFAMILY Retrovirus zinc finger-like domains 639 677 IPR036875 GO:0003676|GO:0008270
Ahy19g0977 708 ProSiteProfiles Zinc finger SWIM-type profile. 496 534 IPR007527 GO:0008270
Ahy19g0977 708 ProSiteProfiles Zinc finger CCHC-type profile. 657 674 IPR001878 GO:0003676|GO:0008270
Ahy19g0977 708 Pfam SWIM zinc finger 510 531 IPR007527 GO:0008270
Ahy19g0977 708 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 156 IPR031052 GO:0006355
Ahy19g0977 708 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 163 573 IPR031052 GO:0006355
Ahy19g0977 708 Pfam MULE transposase domain 221 315 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0977 Ahy-Chr19 15487945 15492332 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g0977 MULE 4.40E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0977 - - aip:107615119 1469.14