Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0963 ATGTTGTGTTCGTCATGGAAATGGTTGTCAATAATTGATCATCCAACAACTGTGATTTCTTTGATTAAAGAAGAATGGATCCATCGAATTATCTTGATGTCTCAAGGATTGCATTTTGGTTCAAATGGCACTCCATCCATATTCTCTCCGGTAAGGAAAAGCCCTAGTTCTGCGGAAAAGAAAGCGAAAAAGAAGGGTGACAAGTGCCATTTTTCACATGATTCAGTGCCTTTTACCAAATCAAAGCCATGCTCCTTTTTCGTTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGATCATCAACTCTCCAAGTATCCTTGTGTTAGCTTTGTGTCCGGAGGTTTTTGTGTTAGAGGTGAATGTATGCTTGTTTTCGCACCAGCCAAAAGAAGATTTTGCTACACCTTCAAGGGTTCACAACCTAGGAATGAAATCTCCACACTTTTTAGGAAACACAAATTCCAACATGCCACCTAA 483 0.4058 MLCSSWKWLSIIDHPTTVISLIKEEWIHRIILMSQGLHFGSNGTPSIFSPVRKSPSSAEKKAKKKGDKCHFSHDSVPFTKSKPCSFFVRHSCMKGDDCPFDHQLSKYPCVSFVSGGFCVRGECMLVFAPAKRRFCYTFKGSQPRNEISTLFRKHKFQHAT* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0963 160 ProSiteProfiles Zinc finger C3H1-type profile. 78 105 IPR000571 GO:0046872
Ahy19g0963 160 Gene3D - 76 133 - -
Ahy19g0963 160 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 53 124 IPR045124 GO:0003723|GO:0045892
Ahy19g0963 160 SUPERFAMILY CCCH zinc finger 80 103 IPR036855 GO:0046872
Ahy19g0963 160 PANTHER PROTEIN SUPPRESSOR OF SABLE 53 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0963 Ahy-Chr19 15035034 15039008 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy19g0963 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0963 - - ahf:112776212 331.257