Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0962 ATGGAGCAAGCTGAATTGGATACCTCAAAACCACCGAGTTTTCCTCCTTACCGCCGATCACACTTACGCAGCGAAACATACCTCACTCTCACTCGAATTTTCTCTCATCTTCCTGCCACACTTGATAATGGCAATGGTAAAAAGAAGCCAGAAAAAAAGGAAAAGGGACCCGAGTTCCCTGAATCTGTTGGTTCTGATTTTATACGTCCCATGAGTGCTGTCCCGATCGAAAGCATACAGGAGTTTGACGAGACTGTTGAAGGGACTGGAAACAAGGGCAGGGTATGTGTTGTCAATGATATTGTTTTGGGTGATATAGAGGAGATGATGGGAATAGAAGAAGTTGAGGATACTTCGAGGACGCTGCTGCAGGACAGGTGTAACGATGCAGATAAAGAGCAACAAAGGATAATGGATGAGTTGGAACTGGTTGTGAATGGAACACAAAATATTGTTCGTGATAGTGGTTTAATCTCTTTGAGTGCAGGGTCAGGTGAGGAACAGAATGGCAGCAATGCAGGTGAGATGCAAGTACAAGGCTCAACGGATTCTCTTCCAAATTCTAAAGAAGCTGAAGTTGAGAAGGTAGAGCTGGATTATGAAGATGAAAGGCTGCTGGATTATGATAATTTGGAAGATAAATGTGAAATGAAAAATGAAAGAAATTTAGAAAAGTCAACTTGTGTAAACAATGCATCAATTTCTTCAAATATTCATATTGAAAACGAGGACATAGAAGAGGGAGAACTTGTTGGAGACTTTGGAGTGGATTGTAATTCGTTTGACATGCCTACTGCAGATTCATTTATTCCTCAAACGAAAATTGATGAGGTTCAGAACCCCGAAAGTATTAATATGGGGAATACAGAAAAAGAAGGTTTAGGCAAAGAAATAGGTAGTAAACCGGTTACTGACGTATTGGAAGAAGACTCTGACCAAGATCATGGAAACCCTGCTGCATCAGAGAAGGTTGATGTCAGCTGTAAAAAAAAGCGTGGCCCTGGTTCTGCGGAAAAGAAAGCAAAAAAGAAGAAAAAAGCGCGGAAAAAACGGGCAGAAAAGAACAAACAACTTGGTGTTAAAAGGTTGAAGTTGTCTCTAGTACAACAGAAACCAAAAACCATCTCTTATTGTCGCCATTTTCTTGTTGGAAGATGCTATGAGGGTGACAAGTGCCATTTTTCACATGATACAGTGCCTTCTACCAAATCAAAGCCATGCTCCTTTTTCGCTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGACCATCAACTCTCCAAGTATCCTTGTGTTAACTTTGTGTCCGGAGGTTTTTGTGTCAGAGGTGATGCATGCTTGTTTTCGCACCAGTCACCAGCCAAGGAAGATTTTGCTACACCTTCAAGGGTTCACAAACCAGGAATGGAATCTCCACACTTTTCAGGAAACACAAATTCCAACATGCCACCTAACATTCATGGCTGTAGTTCTATCCAACAAAACCATTTGATCAATCCTCCAAGAGTTCATTCTGACATCAATTCGGAACATAAAGCGACAAACACTGTACAGAAACAGCTTAAGCTTGCATCTAAAGGAGTTAGTTTCGTCGATGTTGCAAAGCTATCATTGCCTTCTCCTACTACGCCAAAGGAAGGCATGACCAAAGTTGGCTCATCCTCTTCTGACCAAAGTACATCTGGAACAAATCAAACCTTGGTTGAAATTCCAAAGAAATTGCCAGCTAGGATTCCAAAGGGAATTAACTTTCTTGCTTTTGGGAAAGATCCTGTGTGCAGTTTTAAGAGTTCTGTTAACTCCCTTGTAATTGGGGAAAATAGTTTCAGTTTGTTTGATCATACTAGTTCATCCTTAAAAGATGCAACAAAAGGAAGAGTACCACCGACTGATTTAGTCTCCGGTGAGATTTCTGGTAAAAATCAATCGGTGGCAGAAAGTATAAAATCGAGTTTTCCAGGAAAAGCTTCAATGAATGATGCTTCAACTGGTTTACAAGGTAGCTCTCATGTGGATGACGACGGAAGTAAACCAGTCCAAGAGGCAAGTGGGGCATCTGATTCTTTTCAAATTTCCGCAGCAACACTGTCGCCATTTATGCGTCTGGTTTCTCCTTCATCTTCAGAACAGCTACCATCTAGAAAGGAGCTCTTGTCGACTGTCTTGTCATTTGCAGCAGAGCATGAATCAGTTATCAAGATGAAAGATTCTGCTGGCACTTCAACTGCATAA 2235 0.4143 MEQAELDTSKPPSFPPYRRSHLRSETYLTLTRIFSHLPATLDNGNGKKKPEKKEKGPEFPESVGSDFIRPMSAVPIESIQEFDETVEGTGNKGRVCVVNDIVLGDIEEMMGIEEVEDTSRTLLQDRCNDADKEQQRIMDELELVVNGTQNIVRDSGLISLSAGSGEEQNGSNAGEMQVQGSTDSLPNSKEAEVEKVELDYEDERLLDYDNLEDKCEMKNERNLEKSTCVNNASISSNIHIENEDIEEGELVGDFGVDCNSFDMPTADSFIPQTKIDEVQNPESINMGNTEKEGLGKEIGSKPVTDVLEEDSDQDHGNPAASEKVDVSCKKKRGPGSAEKKAKKKKKARKKRAEKNKQLGVKRLKLSLVQQKPKTISYCRHFLVGRCYEGDKCHFSHDTVPSTKSKPCSFFARHSCMKGDDCPFDHQLSKYPCVNFVSGGFCVRGDACLFSHQSPAKEDFATPSRVHKPGMESPHFSGNTNSNMPPNIHGCSSIQQNHLINPPRVHSDINSEHKATNTVQKQLKLASKGVSFVDVAKLSLPSPTTPKEGMTKVGSSSSDQSTSGTNQTLVEIPKKLPARIPKGINFLAFGKDPVCSFKSSVNSLVIGENSFSLFDHTSSSLKDATKGRVPPTDLVSGEISGKNQSVAESIKSSFPGKASMNDASTGLQGSSHVDDDGSKPVQEASGASDSFQISAATLSPFMRLVSPSSSEQLPSRKELLSTVLSFAAEHESVIKMKDSAGTSTA* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0962 744 PANTHER PROTEIN SUPPRESSOR OF SABLE 173 684 - -
Ahy19g0962 744 SMART c3hfinal6 401 427 IPR000571 GO:0046872
Ahy19g0962 744 SMART c3hfinal6 373 398 IPR000571 GO:0046872
Ahy19g0962 744 SMART c3hfinal6 429 453 IPR000571 GO:0046872
Ahy19g0962 744 MobiDBLite consensus disorder prediction 543 565 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 45 60 - -
Ahy19g0962 744 SUPERFAMILY CCCH zinc finger 372 397 IPR036855 GO:0046872
Ahy19g0962 744 Gene3D - 366 429 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 276 355 - -
Ahy19g0962 744 Pfam CCCH-type zinc finger 378 397 IPR041367 -
Ahy19g0962 744 ProSiteProfiles Zinc finger C3H1-type profile. 372 399 IPR000571 GO:0046872
Ahy19g0962 744 ProSiteProfiles Zinc finger C3H1-type profile. 401 428 IPR000571 GO:0046872
Ahy19g0962 744 SUPERFAMILY CCCH zinc finger 430 453 IPR036855 GO:0046872
Ahy19g0962 744 ProSiteProfiles Zinc finger C3H1-type profile. 431 454 IPR000571 GO:0046872
Ahy19g0962 744 Coils Coil 337 357 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 619 641 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 294 334 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 1 21 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 653 688 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 335 355 - -
Ahy19g0962 744 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 173 684 IPR045124 GO:0003723|GO:0045892
Ahy19g0962 744 MobiDBLite consensus disorder prediction 653 671 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 39 66 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 539 565 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 161 187 - -
Ahy19g0962 744 MobiDBLite consensus disorder prediction 161 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0962 Ahy-Chr19 15022133 15029538 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy19g0962 zf-CCCH_4 2.80E-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0962 - - adu:107464618 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0962 19 15022133 15029538 Ahy9g0737 9 11274778 11283288 hybridization