Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0955 ATGCCTCTTGTTTCCACCCCATATCCAGTCTGGTCCATGTACCTCCTCCATGCTTCCCTTCTCTTTTATGTAAACTTAGTGTGGCTACAGCCTACAACAGCAGCCACGGCCGCCGCCTTGGGAAATGATACTGATTTCATGGCATTGCTCAAGTTCAAAGAATCAATATCTGATGACCCACACGGAGTTTTGACATCATGGAACACCTCTACCCACTTTTGTAACTGGCATGGAGTCACATGCAGCACCAAACATCAAAGGGTTGTAATGTTGAATCTTAAAAGATCTGATTTGCGTGGGATTATATCGCCTTATATTGGCAATCTCTCCTTTTTGAGAAACCTTTACCTCCAAAACAATAGCTTCTATGGAGAAATTCCAACGGAGTTGGGTCGTTTGTTCAGACTACAACAACTCTCACTCTCAAACAACATACTAACAGGGGAGTTTCCTATCAAATTGACAAATTGCTCTGATCTAAGGCACTTAAATGTGTCAAGCAACAATCTCCATGGCAAAATACCAATAGAGATTGGATCACTAAGGAAGCTTGAAAAGCTGAATCTTTTCACAAATAATTTCTCCGGACAAATCCCACCTACCATGTGGAATATTTCTTCTCTTGATGTTCTCTCTCTGGCCTATAATAACTTGGAGGGCGATTTACCAGAAGAAATGGGACAACTTAGAAACTTGTCAGTTTTCGCAGTACCTGGAAACAAATTGTCCGGTACGCTTCCTGCTTCACTTTACAATATGTCATCTCTCTTTTTCATCACAGCTGCAGAAAACCAATTTCACGGCTCCCTTCCAGCCAACATGTTCTCCACCCTCACCAATCTGCAGGTGTTTGGCATTGGAGCAAATCAAATGTCAGGTCTTATCCCAACTTCCATCACAAATGCATCTTTACTTCAAGTATTTGATATTGGTGTTAACAGTTTTGTTGGACAAGTTCCAAGTCTAGGAATGTTGAAAGACCTTCACTGGCTAAACTTAAATTATAATAATCTAGGCAACGGTTCAGATAATGACTTGGATTTTACTACATCTTTGGTAAATTGTACCAAATTGGAAAATTTGATTTTGTCAACCAACAAATTTGGGGGTCCTTTGCCCAACTCCATAGGTAATTTGTCAACCCAACTCATTCGACTATATCTTGGTGATAACCAGATATATGGAACTATTCCTGAATCTATAGGAAATTACATAAATTTAATTGCCTTGGTTCTAGAATACAATCAATTTACTGGGACTGTTCCAAATACTTTTGGGAAGCTTCATAAGCTCCAACTGTTAGGTTTGGGGATAAACCAACTATCAGGACAGATACCTAGCTCCTTGGGTAATCTTACTCAATTGCTTCAAATAAGCATTTCAAACAACAAGTTGGAAGGAAAAATTCCACCCATAGTTGGAAATTGGCAAAAGTTACAATACCTGGAACTTTCAGGGAACAATCTTAGTGGTGCTATACCCTTGGAGGTATTCAGCCTTTTCACCTTGTCAACATTGTTGAACTTATCTCATAACTCATTTTCTGGCACTATACCCGTTGAGGTAGGAACCCTTAATAACCTTGGCACTCTGGATCTATCTAAAAATGATCTGTTTGGAGAGATTCCCACAACCATAGGAGAGTGTATAAATTTGGAATACCTAAACTTACAGGGGAATTCCTTCAATGGGACAATACCTCCATCAATTGCTTCATTAAAGAGCCTCATCCAATTGGATCTATCACAAAATAAATTGTCTGGATCGATTCCAACAGCATTGCAGAGCCTTTCTCTACTAACATACTTAAATCTGTCTTTCAATAAATTGGATGGCAAGGTACCAACAGAAGGAGTTTTCAAGAATACAAGTGCAATATCAATAGCAGGCAACAAGAAGCTTTGTGGGGGCATCTCAAAGCTCCACCTGCCACCATGCCCCAATACTAACCAACAAAAAAAGCAGCATAACTTGAAGCTAGTGAGAATCATAATTTGTGTGGTCATTTGTCTTCTACTGTTGTCAATTCTTACTATATGTTGGAGTAGGAGGCAAAAGCAACTATCATCTTTGATATCAAAAACAACAGACCAGAGCTCGATAGTGTCGTACCAAAGCTTATATGCTGCTACAGAAAGGTTTTCTACCAACAATTTGATTGGTTCTGGGAGTTTTGGTTCTGTGTACACAGGATTCCTAAAATCAGAAGACAGGGTCGTTGCCATAAAGGTGATCAACCTTCAAATGAGAGGAGCTCATAAGAGTTTCGTCACTGAATGCAATGCACTAAGAGTTATTAGACATCGAAACCTTGTGAAGATTCTTACATGCTGCTCAAGCATAGATTATCGCGGGGAAGAATTCAAAGCACTAGTTTTTGAGTACATGTCTAATGGAAGCTTAGAAAAGTGGCTGCATCCACAAGGTGAAACTGCAGATCCAACACATACTTTGGACCTTGCTCACAGATTAAATATTCTTATAGATATAGCTTCAGCGTTACATTATCTTCACTATGAGTGTGAACAACCTATTGTTCATTGTGATATAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTAGCTCATGTGACTGATTTTGGATTAGCAAGGATTCTCTCAACAATAAATGGCTCCTCTCATAACCAATCCAGCACAAGTGGATTCAAAGGGACCATTGGATATGCTCCTCCAGAGTATGGAATAGGCTCTGAGGTGTCAACACAAGGTGATGTATATTCTTTCGGGATTCTAGTATTGGAAATGCTAACTGGCAGAAGACCCACGGAAGAATTTTTTGAAGACGGTGACAATCTTCATAACTATGTGGAAAGGGCATATCCAGAGAAGCTTTTGGAGATTGTGGACTCAACCTTTCTACTGAAACAATTAGAGAAACCATTAGCAGAAAAAGAAGGCAACATAGTGTCGTGTGTATTTTCTCTAATCAAAATTGGACTAGCTTGCTCAGTTGAATCTCCAAGAGAAAGAATAAATATGAGGGATGTCATTAGGGAGCTAAATGTAACCAGAAACGCATTTCTTTGTGGTTTAGTAAATGTGGAGTATTGTTGA 3078 0.3938 MPLVSTPYPVWSMYLLHASLLFYVNLVWLQPTTAATAAALGNDTDFMALLKFKESISDDPHGVLTSWNTSTHFCNWHGVTCSTKHQRVVMLNLKRSDLRGIISPYIGNLSFLRNLYLQNNSFYGEIPTELGRLFRLQQLSLSNNILTGEFPIKLTNCSDLRHLNVSSNNLHGKIPIEIGSLRKLEKLNLFTNNFSGQIPPTMWNISSLDVLSLAYNNLEGDLPEEMGQLRNLSVFAVPGNKLSGTLPASLYNMSSLFFITAAENQFHGSLPANMFSTLTNLQVFGIGANQMSGLIPTSITNASLLQVFDIGVNSFVGQVPSLGMLKDLHWLNLNYNNLGNGSDNDLDFTTSLVNCTKLENLILSTNKFGGPLPNSIGNLSTQLIRLYLGDNQIYGTIPESIGNYINLIALVLEYNQFTGTVPNTFGKLHKLQLLGLGINQLSGQIPSSLGNLTQLLQISISNNKLEGKIPPIVGNWQKLQYLELSGNNLSGAIPLEVFSLFTLSTLLNLSHNSFSGTIPVEVGTLNNLGTLDLSKNDLFGEIPTTIGECINLEYLNLQGNSFNGTIPPSIASLKSLIQLDLSQNKLSGSIPTALQSLSLLTYLNLSFNKLDGKVPTEGVFKNTSAISIAGNKKLCGGISKLHLPPCPNTNQQKKQHNLKLVRIIICVVICLLLLSILTICWSRRQKQLSSLISKTTDQSSIVSYQSLYAATERFSTNNLIGSGSFGSVYTGFLKSEDRVVAIKVINLQMRGAHKSFVTECNALRVIRHRNLVKILTCCSSIDYRGEEFKALVFEYMSNGSLEKWLHPQGETADPTHTLDLAHRLNILIDIASALHYLHYECEQPIVHCDIKPSNVLLDDDMVAHVTDFGLARILSTINGSSHNQSSTSGFKGTIGYAPPEYGIGSEVSTQGDVYSFGILVLEMLTGRRPTEEFFEDGDNLHNYVERAYPEKLLEIVDSTFLLKQLEKPLAEKEGNIVSCVFSLIKIGLACSVESPRERINMRDVIRELNVTRNAFLCGLVNVEYC* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0955 1025 SUPERFAMILY L domain-like 43 338 - -
Ahy19g0955 1025 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Ahy19g0955 1025 PANTHER LRR RECEPTOR-LIKE KINASE 30 1017 - -
Ahy19g0955 1025 Gene3D Ribonuclease Inhibitor 345 650 IPR032675 -
Ahy19g0955 1025 SUPERFAMILY L domain-like 381 636 - -
Ahy19g0955 1025 CDD STKc_IRAK 720 1009 - -
Ahy19g0955 1025 SMART LRR_typ_2 109 133 IPR003591 -
Ahy19g0955 1025 SMART LRR_typ_2 573 596 IPR003591 -
Ahy19g0955 1025 SMART LRR_typ_2 597 622 IPR003591 -
Ahy19g0955 1025 SMART LRR_typ_2 428 452 IPR003591 -
Ahy19g0955 1025 SMART LRR_typ_2 525 549 IPR003591 -
Ahy19g0955 1025 SMART LRR_typ_2 476 500 IPR003591 -
Ahy19g0955 1025 SMART LRR_typ_2 205 229 IPR003591 -
Ahy19g0955 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Ahy19g0955 1025 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Ahy19g0955 1025 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Ahy19g0955 1025 Pfam Protein kinase domain 715 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0955 1025 Gene3D Transferase(Phosphotransferase) domain 1 796 1016 - -
Ahy19g0955 1025 ProSiteProfiles Protein kinase domain profile. 714 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0955 1025 Gene3D Ribonuclease Inhibitor 44 156 IPR032675 -
Ahy19g0955 1025 PANTHER OS04G0122200 PROTEIN 30 1017 - -
Ahy19g0955 1025 Gene3D Ribonuclease Inhibitor 157 344 IPR032675 -
Ahy19g0955 1025 Gene3D Phosphorylase Kinase; domain 1 677 795 - -
Ahy19g0955 1025 SMART serkin_6 714 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0955 1025 SUPERFAMILY Protein kinase-like (PK-like) 695 1008 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0955 Ahy-Chr19 14965947 14969956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0955 42 1016 Receptor kinase-like Gene Family AT3G47570 46.154 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy19g0955 Pkinase 1.40E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0955 - - gmx:100785561 1123.61