Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0952 ATGTCGAGTAACAATCTCTACGGCCAAATACCAATGGAGATTGGCACTCTTAAGAAGCTTGAAAAGTTGAGTCTTAACAAGAATAACTACTCTGGAGAAATTCCATCTTCCATATGGAATATCTCTTCTCTAAGTATTCTTTCTATGGGTTATAATTACTTGGAAGGCAAGATACCTGAAGAAATTGGAAAATTAAAAAGCTTATCAGGTTTTGCCATTGGTGCCAATAAACTGTCCGGGGAGCTTCCTTCTTCGCTTTACAATCTGTCCTTGCTCGCTCTTTTCTATGCTGCAGAAAACCAGTTTCATGGCTCTCTTCCATCCAACATGTTCTCCAACCTCATCAGTCTGCAAGAGATTGGCATTGGAGGGAATCAAATTTCAGGTCCAATTCCAACTTCTATTTCAAATGCATCTTCACTTCAACTTTTTGATATTGGCTATTGTAGTTTTGTTGGAAAAGTTCCAAATCTAGGAAACCTGAAGGATCTTTATTGGCTAAATTTAAACTACAACAATCTTGGTAGTAATTCAGCTCTAGACTTGGATTTCATAACATCTTTGATTAATTGTACTGAATTGGAAAGTTTGGTTTTGTGTTCCAACAATTTTGGAGGTGTTTTACCCAACTCCATAGGGAATTTGTCAACTCAACTCACTGAAATTAGTCTTGATTTTAATCACATACATGGAACTATCCCTGAAACTATATGCAATAACATAAACTTAATTACCTTGAATTTGGAATATAACCACCTTACTGGGTTTGTTCCAAATTCTTTTGGAAAGTTTCAGAAAATGCAACTATTGAGTTTGGGTGCAAACCACCTTATTGGTGACATACCTTTCTCCTTGGGTAACCTCACTCAACTGGTTGAAATAAGAATTTCAAACAACATGTTGCATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTAGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAGGTTTTTAGCCTTTCATCCTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATATCTCCAATAACTATCTATCTGGCCAGATTCCTATGACTATTGGAAAGTGCACAAGTATGGAATATTTAAACTTACATGGTAATTCTTTCAGTGGCATGATACCTTCATCAGTAGCTTCATTGAAAGGCCTCTCTCATTTGGATCTCTCGCAAAATAACTTGTCCGGATCAATTCCAACAGATATGCAGAGGCTTTCTTTTCTAACATATTTGAATGTGTCTTTCAATATGCTAGAAGGGAAGGTACCATTGGAGGGTGTATTCAAGAATGCAACTTCAATTTCAATTGTTGGTAATAATAAGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAACGTTATGGCAAGAAGCAATCACCATAATTTGAAGCTAGCCATAATCATAATTTGTGTGGTTGTATGCCTTATTTTGCTTTCAATTGTTGTTGTTGTTTTCTTGAGCAAGAAGAAGAAAAGAACATCATCTTTGACAGCATCAACAAATCAGTATTCAATGGTGTCATACCAAATCCTACATCATTCAACAGAGGGGTTTTCTACCAGTAACTTGATTGGATCTGGCAGCTTTGGTTCTGTGTATAAAGGATTCCTTGAATCCGAACACAAGTTCGTCGCCATAAAGGTGATAAACCTACGAATGAGTGGAGCTCACAAGAGTTTCATTGCCGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCTCGAGCATAGATTATAGCAGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTGTTGATGTGGCTTCTGCATTACATTATCTTCACTATGGATGTGAACAACCTATTGTTCATTGTGATCTAAAGCCAGAGAATGTGCTTCTTGACGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTAGCACAACTGTGTTCAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCAATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTGACTGGAAGGAGGCCAATGGAAGAAATGTTTAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCAAACAATCTTCTAGAGATTATGGACTCAACTCTTTTGCCAAAACAAATTGGAGAAGAAGAAAACTACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAATTGGACTTGCTTGTTCAGTTGAATCCCCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAATCTTACCAAGGATGTATTTCTTCAACATTGA 2565 0.3719 MSSNNLYGQIPMEIGTLKKLEKLSLNKNNYSGEIPSSIWNISSLSILSMGYNYLEGKIPEEIGKLKSLSGFAIGANKLSGELPSSLYNLSLLALFYAAENQFHGSLPSNMFSNLISLQEIGIGGNQISGPIPTSISNASSLQLFDIGYCSFVGKVPNLGNLKDLYWLNLNYNNLGSNSALDLDFITSLINCTELESLVLCSNNFGGVLPNSIGNLSTQLTEISLDFNHIHGTIPETICNNINLITLNLEYNHLTGFVPNSFGKFQKMQLLSLGANHLIGDIPFSLGNLTQLVEIRISNNMLHGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDISNNYLSGQIPMTIGKCTSMEYLNLHGNSFSGMIPSSVASLKGLSHLDLSQNNLSGSIPTDMQRLSFLTYLNVSFNMLEGKVPLEGVFKNATSISIVGNNKLCGGVLQLHLAPCPANVMARSNHHNLKLAIIIICVVVCLILLSIVVVVFLSKKKKRTSSLTASTNQYSMVSYQILHHSTEGFSTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLRMSGAHKSFIAECNALKFIRHRNLVKILTCCSSIDYSSQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVVDVASALHYLHYGCEQPIVHCDLKPENVLLDDDMVAHVTDFGLARLLSMTNGDPHNQSSTTVFKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMFKDDNNLHNYVKMAYSNNLLEIMDSTLLPKQIGEEENYTKKLTMCVFSLIRIGLACSVESPNERMNMADVTRELNLTKDVFLQH* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0952 854 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Ahy19g0952 854 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Ahy19g0952 854 SUPERFAMILY L domain-like 190 472 - -
Ahy19g0952 854 PANTHER LRR RECEPTOR-LIKE KINASE 2 852 - -
Ahy19g0952 854 ProSiteProfiles Protein kinase domain profile. 551 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0952 854 ProSitePatterns Protein kinases ATP-binding region signature. 557 580 IPR017441 GO:0005524
Ahy19g0952 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Ahy19g0952 854 SMART serkin_6 551 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0952 854 Pfam Protein kinase domain 553 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0952 854 Gene3D Transferase(Phosphotransferase) domain 1 633 851 - -
Ahy19g0952 854 PANTHER OS04G0122200 PROTEIN 2 852 - -
Ahy19g0952 854 SUPERFAMILY Protein kinase-like (PK-like) 525 845 IPR011009 -
Ahy19g0952 854 SUPERFAMILY RNI-like 2 263 - -
Ahy19g0952 854 CDD STKc_IRAK 557 845 - -
Ahy19g0952 854 Gene3D Phosphorylase Kinase; domain 1 513 632 - -
Ahy19g0952 854 Gene3D Ribonuclease Inhibitor 179 482 IPR032675 -
Ahy19g0952 854 Gene3D Ribonuclease Inhibitor 1 178 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0952 Ahy-Chr19 14903816 14907182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0952 1 853 Receptor kinase-like Gene Family AT3G47570 45.665 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy19g0952 Pkinase 3.20E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0952 - - ahf:112708871 1231.47