Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0951 ATGTTTCATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTAGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAAGTTTTTAGCCTTTCATCTTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATATCTCCAATAACTATCTATCTGGCCAGATTCCTATGACTATTGGAAAGTGCACAAGTATGGAATATTTAGACTTACATGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAACGTTATGGCAAGAACAATCACCATAATTTGAAGCTAGCCATAATCGTAATTTGTGTGGTTGTATGCCTTACTTTGCTTTCAATTGTTGTTGTTTTCTTGAGCAAGAAGAAAAAAAGAACATCATCTTTGACAGCATCAACAAGTCAGCCATCAATGGTGTCATACCAAATCCTACATCATTCAACACAGGGGTTTACTACCAGTAACTTGATTGGATCTGGTAGCTTTGGTTCTGTGTATAAAGGATTCCTTGAATCTGAACACAAGTTTGTCGCCATAAAGGTGATAAACCTTCAAATGAGTGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCACGAGCATAGATTATAGCGGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTATCGATGTGGCATCTGCATTACATTATCTTCACTATGGATGTGAACAACCTGTTGTTCATTGTGATCTAAAGCCAGAGAATGTGGTTCTTGATGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTAGCACAACTGTGTTAAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCAATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTGACCGGAAGGAGGCCAATGGAAGAAATGTTAAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCACACAATCTTCTAGAGATTACGGACTCAACTCTTTTGCCAAAACAAATTGGAGAAGAAGAAAACTACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAGTTGGACTTGCTTGTTCAGTTGAATCACCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAACCTTACCAAAGATGTATTTCTTCGAGATTGA 1440 0.3785 MFHGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDISNNYLSGQIPMTIGKCTSMEYLDLHALWRCLTVTSCTMPCQRYGKNNHHNLKLAIIVICVVVCLTLLSIVVVFLSKKKKRTSSLTASTSQPSMVSYQILHHSTQGFTTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLQMSGAHKSFIAECNALKFIRHRNLVKILTCCTSIDYSGQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVIDVASALHYLHYGCEQPVVHCDLKPENVVLDDDMVAHVTDFGLARLLSMTNGDPHNQSSTTVLKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMLKDDNNLHNYVKMAYSHNLLEITDSTLLPKQIGEEENYTKKLTMCVFSLIRVGLACSVESPNERMNMADVTRELNLTKDVFLRD* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0951 479 SUPERFAMILY Protein kinase-like (PK-like) 149 470 IPR011009 -
Ahy19g0951 479 SMART serkin_6 176 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0951 479 Gene3D Ribonuclease Inhibitor 1 96 IPR032675 -
Ahy19g0951 479 Gene3D Transferase(Phosphotransferase) domain 1 258 476 - -
Ahy19g0951 479 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 104 477 - -
Ahy19g0951 479 Gene3D Phosphorylase Kinase; domain 1 156 257 - -
Ahy19g0951 479 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 95 - -
Ahy19g0951 479 ProSitePatterns Protein kinases ATP-binding region signature. 182 205 IPR017441 GO:0005524
Ahy19g0951 479 ProSiteProfiles Protein kinase domain profile. 176 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0951 479 SUPERFAMILY L domain-like 2 95 - -
Ahy19g0951 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Ahy19g0951 479 Pfam Protein kinase domain 177 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0951 479 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 104 477 - -
Ahy19g0951 479 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0951 Ahy-Chr19 14895144 14897039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0951 1 96 Receptor kinase-like Gene Family AT3G47570 36.458 2.02e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy19g0951 Pkinase 1.60E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0951 - - ahf:112775141 935.636