Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0929 ATGGCAATGCCATTCGAACTCGCGGGTATCCACTCCGCCCCTACCCGCTTGGGGCAGGTAATTACCCGCCCCGCATCGGGGCAGGTTCTTGAGAGGGGCAGGGCGGAATCGGATTTAGGAGGTTTCTACGGTGGGGAAAGTATATTCAAGATTTTGGTGGACCAGCCGAATGGTTTTGTGGAGCCTAGCTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTCGCAGGATGGTGACGATGGAATGAGCGGCGAAACTGTGCCGGTAGAGGACGCAGAAGCGATGGACTCGTCCGCCGCAGATGCAGACATAGATGCAGAAGCAGGAGTGAGGATTGTTGAAGGGATAGGATCCTTTGGCGCGATTGAATTTTCTTCCCTCACAGCCAAGGACGTCCTTACAACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATTCGGTCGCATCAAGGGATTCTCGGTCAGGAGGTCTAAGGTGGGTCGCAGAACAAAGCAGGGGGCGGAGAGCGAAATAATTTGGCAGATATTCATGTGCTCGAGGGAAGGGGAGCGAGACGGGAAACACATGCAGCGGAAAGACAGGAAGAAGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGTCCACGCTGATGATGCCAGCGGGCGATGGTTTGTTGAACAATTCTGTGACAACCACAATCATCCCATGCTGGATGCGAGGTTTAGGGGAGGATTCGAGACTGTCGGGTTAGAGATAAAGGACATATATAATGCGATAGAGAAGCAAAGGCGGGCAGGCGCGACAGATGCGGAGTCCGCGTTGAAGTTCTTGGGAACTTTAAGGACGACTGATTCCGGGATATTCTGGAGGTACTCGCTGGATGTTGACAAGAGGCTGGAAAATCTCTTCTGGTACGATCGTACAAGTCGTTATGACTACAGCGTGTTCGGGGATGTCCTGGGTTTTGATGCAACTTACGGTCGTAACAAATACAAGTGCCCTTTGGTAATATTCTCAGGGGTGGAACATCATATGAGGACGGTGGTGTTCGGCTGTGCCATATTGAGCAACGAGAGCAAAGCAAGCTATGTGTGGTTGCTGCGGTCATTCCTTGAGGCAATGAAGGGAAAACAGCCGAAGTCTGTCACCACGGACGGTGACCTCGCCATGAAGAGTGCGGTTAGCATAGTTTTTCCCGATGCACATCACAGGTTGTGTAGCTGGCATTTGTTAAGGAACGCCACTGTTAGAGTTGGACGACCGGGTTTTCTCAGGAAATTCCATTTATGCCTCATGGGAGATCTAGAGGTTGACGAATTTGAGACAATATGGACGGATAACGTGGCGGACCACGAGTTGGAGGATCATTTGTGGATAGTGGAGATGTATGCCAAGAAGCATTCCTGGTCCAATGCCCATATCCGGGGAAAATTCTTCGCAGGTCTGAAGATGACATCCAGGTGCGAGGCTTTGAATATGCAGCTTGAAAAATTTATACACAACGGGTACAATCTAAGGGAGTTTGTGGAGCACTTCCAACACTATTTGGAGTTCATGAGGAGGAGAGAACTAGTGGCAGACTACAAGTTTGCGTATGGCGAGCCTGTTGTGAAGACGAAACTCGAGGCCATTGAGCAGTTCGCTGCAACGGTTTATACAAGAGAGGTTTTCAAACTGTTTCGGGAGGTGCTGATGCTAGCCAGCAACGTTAGAGTTGTGTCCACGAAGAGGACGAGCGCTTGTGTTTTGTTCGAGGTTGCAATGTACTGCAAGCAGAGATCATGGGCCGTGTCCTGGGCTGAGGAAGATGATGAATTCAGCTGTTCTTGTCAGTGGATGGAGTCCTTTGGGCTTCCTTGTGTCCACATGGTTGGGGTTCTGGTTTATCTGAACATGACAACTATCCCCAAAGGCCTAATACTTGACCGGTGGGCAAAGAGGACAAAGCAGCCACGTGCACCCTGCGACAAAACTCGTGTTGGGGAGATCCCAGACGCGGCATACATGAGCATGCACGCGGCGATGCTGGATGATTGCAGGGAGCTGGTGAGCCTGTCTTGCTGGTTTTTTGAGGACTACGTGGATGTGAAAACAAGGTTGGCAAAGGAGCGTCAATCCCTGCGGGACAAACATCGCCAAAGGTTGGGTGTTCCTGAGGAGGCCAGCAGGGTGTCTGTTCGGGATCCGATGCGGGCAAGGTGTCGATTGTGTGGAAAGGGTAGACACAATTCTCGCAAGTGTCAACAATCGAGTATGTGGAAGAACATCGACAGTTTCGAGGCTGGCGCGGCTTACGAAAGCATGGAGGCAGGAGAGGGGGGTGACGAGTACTACAAATTTGAGTGA 2355 0.5125 MAMPFELAGIHSAPTRLGQVITRPASGQVLERGRAESDLGGFYGGESIFKILVDQPNGFVEPSYEFSSNFDRVHASQDGDDGMSGETVPVEDAEAMDSSAADADIDAEAGVRIVEGIGSFGAIEFSSLTAKDVLTTEFTSLQAAYDYYNEFGRIKGFSVRRSKVGRRTKQGAESEIIWQIFMCSREGERDGKHMQRKDRKKDPRPITRCGCEARIKVHADDASGRWFVEQFCDNHNHPMLDARFRGGFETVGLEIKDIYNAIEKQRRAGATDAESALKFLGTLRTTDSGIFWRYSLDVDKRLENLFWYDRTSRYDYSVFGDVLGFDATYGRNKYKCPLVIFSGVEHHMRTVVFGCAILSNESKASYVWLLRSFLEAMKGKQPKSVTTDGDLAMKSAVSIVFPDAHHRLCSWHLLRNATVRVGRPGFLRKFHLCLMGDLEVDEFETIWTDNVADHELEDHLWIVEMYAKKHSWSNAHIRGKFFAGLKMTSRCEALNMQLEKFIHNGYNLREFVEHFQHYLEFMRRRELVADYKFAYGEPVVKTKLEAIEQFAATVYTREVFKLFREVLMLASNVRVVSTKRTSACVLFEVAMYCKQRSWAVSWAEEDDEFSCSCQWMESFGLPCVHMVGVLVYLNMTTIPKGLILDRWAKRTKQPRAPCDKTRVGEIPDAAYMSMHAAMLDDCRELVSLSCWFFEDYVDVKTRLAKERQSLRDKHRQRLGVPEEASRVSVRDPMRARCRLCGKGRHNSRKCQQSSMWKNIDSFEAGAAYESMEAGEGGDEYYKFE* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0929 784 ProSiteProfiles Zinc finger SWIM-type profile. 598 634 IPR007527 GO:0008270
Ahy19g0929 784 PANTHER OS02G0262500 PROTEIN 260 753 - -
Ahy19g0929 784 PANTHER OS02G0262500 PROTEIN 132 239 - -
Ahy19g0929 784 Pfam MULE transposase domain 322 416 IPR018289 -
Ahy19g0929 784 Pfam FAR1 DNA-binding domain 146 240 IPR004330 -
Ahy19g0929 784 Pfam SWIM zinc finger 610 633 IPR007527 GO:0008270
Ahy19g0929 784 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 260 753 IPR031052 GO:0006355
Ahy19g0929 784 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 239 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0929 Ahy-Chr19 14569016 14572811 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g0929 FAR1 2.50E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0929 - - ahf:112777976 1588.55