Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0912 ATGAATGTGATTGATCGGTGCTGGAGACGGGATCCCCAATGGAGGAGCCACCGCGCGCAACTCGCGAACTGCTCCATTGGCTATGCTGGCAAGATGATGAACAACATTGGCAGTGACCTCATCCATTATGAAGTTATAGACCCTACTGATGACCCCATAAACCCTAAGCCTGGTACCTTGCGATATGGAGCTTCTGTGATTCAACAAAAAGTTTGGATCACATTTAAAAGAGACATGAAAATTACATTGGCAAAACCCCTTCTCATTAGTAGCTTTACCGCCATTGATGGCCGCGGCGCCAACGTCCACATTGCTCATAACGCATGCTTTATGATCTTTAAGGCGACGAACGTAATAATCCACAACGTTCGGATCCATGATTGTAAAGCACAAGCTCCGGGATTGGTGATGGGTGCAAATGGGAAGGTGATTTCATTAGGTCAAGTTGATGGGGATGCCATTAGATTAGTCACTGCTTCAAAGATTTGGATTGATCATAATACACTTCAAGATTGCGAAGATGGTCTTCTTGATGTTACACGGGGTTCCACTGATGTCACTGTCTCCAATAACTGGTTCCGGAACCAAGATAAGGTTATGCTTCTTGGGCATGATGATGGATATATTAGAGACCAGAACATGAAAGTTACTGTTGTGTACAATCATTTTGGACCAAATTGTAACCAGCGTATGCCAAGGATCCGTCATGGATATGCACATGTAGCAAACAATCTATACCAGGGATGGATGCAATATGCTATTGGTGGAAGCATGGGACCTAGCCTCAAAAGCCAATCTAACCTCTTCATAGCCCCCGAATCTGGGAACAAGGAGGTGACATGGAGAAAAGGCAACAGCGAAAATGGGAACATGTGGGAATTCCATTCTATAGGGGATGCTTTTGAAAATGGAGCTTCTTTCACGACAAGTGGGAAGAGATGGTGTGGGTTTTTTGTGTGGGCAGATACTAGGCAAGATGAACCAATTGAGAAACCAGAATCTTATGGAGACAATCATGAAGTGAAGATGAACTTTGATTGGAGGCTTGGGAGGTTAGAAGAAGATGTTCGGAATAAAAAATTGGTTAACCAGTTGTTGGAATTAGCTATGTCTGTATTGGTAGTGTTAATGGCTATCCTGTATTGTAAAGCATGA 1155 0.4346 MNVIDRCWRRDPQWRSHRAQLANCSIGYAGKMMNNIGSDLIHYEVIDPTDDPINPKPGTLRYGASVIQQKVWITFKRDMKITLAKPLLISSFTAIDGRGANVHIAHNACFMIFKATNVIIHNVRIHDCKAQAPGLVMGANGKVISLGQVDGDAIRLVTASKIWIDHNTLQDCEDGLLDVTRGSTDVTVSNNWFRNQDKVMLLGHDDGYIRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWMQYAIGGSMGPSLKSQSNLFIAPESGNKEVTWRKGNSENGNMWEFHSIGDAFENGASFTTSGKRWCGFFVWADTRQDEPIEKPESYGDNHEVKMNFDWRLGRLEEDVRNKKLVNQLLELAMSVLVVLMAILYCKA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0912 384 SMART amb_all 78 275 IPR002022 -
Ahy19g0912 384 Gene3D - 1 324 IPR012334 -
Ahy19g0912 384 PANTHER PECTATE LYASE 1 312 - -
Ahy19g0912 384 SUPERFAMILY Pectin lyase-like 1 316 IPR011050 -
Ahy19g0912 384 Pfam Pectate lyase 91 269 IPR002022 -
Ahy19g0912 384 PANTHER PECTATE LYASE 18-RELATED 1 312 IPR045032 GO:0030570
Ahy19g0912 384 PRINTS Pollen allergen Amb family signature 24 41 IPR018082 -
Ahy19g0912 384 PRINTS Pollen allergen Amb family signature 292 316 IPR018082 -
Ahy19g0912 384 PRINTS Pollen allergen Amb family signature 230 249 IPR018082 -
Ahy19g0912 384 PRINTS Pollen allergen Amb family signature 150 171 IPR018082 -
Ahy19g0912 384 PRINTS Pollen allergen Amb family signature 86 102 IPR018082 -
Ahy19g0912 384 PRINTS Pollen allergen Amb family signature 252 271 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0912 Ahy-Chr19 14122536 14126196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0912 32 284 Polysaccharide Lyase AT5G09280 72.332 1.92e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0912 K01728 - gmx:100780437 551.592