Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0901 ATGGATCCACCGCTTTGTGTCAATGGTTGCGGTTTCTATGGTTCTGCTGCCAACAACAATCTTTGCTCAAAGTGTTACAAAGATCACATCAAAGAAACCTTCATCATCATTGAATCAGAAAGCAATAATAATAATAATGGAACATTATTATTAGATGATACCAAATCTCATGATGAACCACCATTAGCTGATGTGTTTGAAAGATTTACCAAAGACCTTGGTGCAACGGTTGATGATATTTCTAACAACAACAAGAAGAATGAGATAAAGAAAAGGTGCAAGAGGTGCAATAAAAAAGTTGGATTAACAGGGTTTGAGTGTCGATGTGGAGATTTATTTTGTGGAAAGCATAGGTATCCAGAAGTTCATGAATGTAAATTCAATTTTAAGGATATTGGTCGCAATATTTTAGCAAAGCAGAATCCTCTTTGCATTAGTGATAAGTTAGATGAAAGAATTTAG 462 0.3442 MDPPLCVNGCGFYGSAANNNLCSKCYKDHIKETFIIIESESNNNNNGTLLLDDTKSHDEPPLADVFERFTKDLGATVDDISNNNKKNEIKKRCKRCNKKVGLTGFECRCGDLFCGKHRYPEVHECKFNFKDIGRNILAKQNPLCISDKLDERI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0901 153 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Ahy19g0901 153 ProSiteProfiles Zinc finger AN1-type profile. 87 133 IPR000058 GO:0008270
Ahy19g0901 153 SMART AN1_Zf_4 93 130 IPR000058 GO:0008270
Ahy19g0901 153 Gene3D - 1 48 - -
Ahy19g0901 153 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 153 - -
Ahy19g0901 153 Pfam AN1-like Zinc finger 93 128 IPR000058 GO:0008270
Ahy19g0901 153 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Ahy19g0901 153 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 153 - -
Ahy19g0901 153 SUPERFAMILY AN1-like Zinc finger 81 147 IPR035896 -
Ahy19g0901 153 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Ahy19g0901 153 Gene3D - 74 147 IPR035896 -
Ahy19g0901 153 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0901 Ahy-Chr19 13916086 13916547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0901 5 151 C2H2 Transcription Factor Family AT3G52800 36.774 8.81e-28 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0901 - - adu:110276973 254.988