LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g0900	ATGGAGAAGCTTAATTATGTTGGGTGCAGTGTACTGGTGATCACTCTAGCATTCACACTTTTTATTTGTGATGCTAATGATGGTAATAATCCGAAAATTCATATTGTTTATTTGGGCTCATTACCTGAAACAAAAACTTCTTATTCTCCCACCTTTCACCACCTTAATATGCTGCAACAAGTTCTTGATGGTAGCAACCCAACAAAATCCTTAGTCCATAGCTACAAGAGGAGCTTTAACGGTTTTGCTGCCATGCTCACGAATCAGCAAGCGGCAAAGTTAACCGAAATGGAAGGTGTTGTTTCAGTTTTCCCAAGCAAGACTCTCCAAACCCAAACAACAAGATCTTGGGATTTCTTGGGACTTCCAAAGGCTCCAAAAGGACATCAAACAGTAGAAACTAATCTCGTTGTCGGACTCTTCGACACCGGGGTTTGGCCCGAATCGGAAAGCTTCAGCGACAAATGTATCACAGACCCTGTTCCAAAAAAGTGGAAAGGTACATGTGCAGGTGGCAAGAACTTCACATGCAACAAGAAGTTGATCGGAGCAAGATTCTACACAGAGGACTCTGCAAGAGACAATGATGGCCATGGAAGCCACACAGCATCAATAGCAGCCGGAAACATCGTTGACAATGCCAGCTTTTACGGCATTGCAGAAGGCACAGCGAGAGGAGCAGTTCCTTCTTCAAGAATCGCTGCTTACAAAGTATGCAGCTCTGTAGGCTGTGCAGACCACGGCATCTTAGCTGCCTTTGATGACGCAATTGCTGACGGAGTTGACGTCATCTCTGTTTCATTTGGGGCTGCTGCCGCATTGAACCTTGAAACAGATTCAGTTGCCATCGGCTCATTTCATGCAATGGCCAAAGGAGTACCTGTAGTCCAATCCGCTGGAAATGCTGGTCCTTATCCTGGCACTGTAGCAAGCGTTGCGCCATGGTTGATAACCGTCGCAGCAAGCACCATAGATCGGCAAATCGTTGACAAGGTCATTCTTGGAAATGGAAAAGTGTTAACCGGGAGGTCGGTTAATTCTTTCGAGTCAAACGGAAGAAGAGTTCCTATTGCTTTGAGCAACGGCAATTCAAGTGAGTGTGAAAAAGAATACGCGGATATATGTGGATGCTTGGATAAAAAATTAGTGAAAGGAAAGATAGTTTTATGTGACAATCATGCGGAAGCTGAACCCAAATCTGCTGGCGCAGTTGGTACAATTGCAAAATTAGATCTTGATGATCTTAACCTAGGTTATGTCACTATAATGCCTTCGGTGTCATTGCTGCCAAAAGATTATGACATTGTTAAATTATACACAAACTCAACAAAAGATCCAAAAGCTGAGATTCTCAAGAGTGAGAGCGGTCAAGATCAGAGTGCTCCTAGACCCGCAGCATTTTCTGGCCGTGGACCAAACGCTATAATTTCAGAGATCTTGAAACCTGATATAAGTGCCCCAGGGGTTAATATTTTGGCTGCTTATTCGCCAATTGGTTCACCAACAGAAGATCCTAGTACGGATAATAGATCTGTGCATTACACTATTCTAAGTGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCGCGTATGTGAAAAGTTTTCACCCTGATTGGTCACCTGCGGCAATTAAATCTGCTATTATGACGTCAGCAAAACCGATGATTACGAATCTGACATATGATGTGGGAGAATATGCATATGGATCTGGACAAGCCAATCCAATTCTAGCAATCAATCCTGGACTAGTTTATGACATTAACAAGGGAGATTATGTGCAAATGCTGTGTAACTTAGGATATGATAATCGCAAAATCAAATTGATATCTGGAGAATTGAATCCGTGCAAGGGAGCTGCAGATAAATCTTTGGTAAGAAATTTAAATTATCCAGCTCTTACAGTTCTGGTTGAACCCAGGGTGCATATTAACATCAGTTTTAGTAGAATAGTTACAAATGTTGGTTTAGCCAACTCGAGTTACAGGGTAAGAATCACACCGAAACCAGAAGTTAACATCACGGTGACACCATGGGTTTTATCCTTCAAAGCATTAAACGAGAAAAAATCATTTGTAGTGAATGTCATTGGTATGATACCAAATGAAACTGCGGTAATCTCATCAATGGTATGGTCAGATGGGACCTATCATGTTCGAAGCCCAATTGTTATAAATGTCTCATTGCTGTAA	2196	0.4217	MEKLNYVGCSVLVITLAFTLFICDANDGNNPKIHIVYLGSLPETKTSYSPTFHHLNMLQQVLDGSNPTKSLVHSYKRSFNGFAAMLTNQQAAKLTEMEGVVSVFPSKTLQTQTTRSWDFLGLPKAPKGHQTVETNLVVGLFDTGVWPESESFSDKCITDPVPKKWKGTCAGGKNFTCNKKLIGARFYTEDSARDNDGHGSHTASIAAGNIVDNASFYGIAEGTARGAVPSSRIAAYKVCSSVGCADHGILAAFDDAIADGVDVISVSFGAAAALNLETDSVAIGSFHAMAKGVPVVQSAGNAGPYPGTVASVAPWLITVAASTIDRQIVDKVILGNGKVLTGRSVNSFESNGRRVPIALSNGNSSECEKEYADICGCLDKKLVKGKIVLCDNHAEAEPKSAGAVGTIAKLDLDDLNLGYVTIMPSVSLLPKDYDIVKLYTNSTKDPKAEILKSESGQDQSAPRPAAFSGRGPNAIISEILKPDISAPGVNILAAYSPIGSPTEDPSTDNRSVHYTILSGTSMSCPHVSGIAAYVKSFHPDWSPAAIKSAIMTSAKPMITNLTYDVGEYAYGSGQANPILAINPGLVYDINKGDYVQMLCNLGYDNRKIKLISGELNPCKGAADKSLVRNLNYPALTVLVEPRVHINISFSRIVTNVGLANSSYRVRITPKPEVNITVTPWVLSFKALNEKKSFVVNVIGMIPNETAVISSMVWSDGTYHVRSPIVINVSLL*	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g0900	731	Gene3D	-	598	729	-	-
	Ahy19g0900	731	Pfam	Subtilase family	135	568	IPR000209	GO:0006508\|GO:0008236
	Ahy19g0900	731	CDD	Peptidases_S8_3	109	554	IPR034197	-
	Ahy19g0900	731	Gene3D	Peptidase S8/S53 domain	136	594	IPR036852	GO:0004252\|GO:0006508
	Ahy19g0900	731	PRINTS	Subtilisin serine protease family (S8) signature	194	207	IPR015500	-
	Ahy19g0900	731	PRINTS	Subtilisin serine protease family (S8) signature	133	152	IPR015500	-
	Ahy19g0900	731	PRINTS	Subtilisin serine protease family (S8) signature	518	534	IPR015500	-
	Ahy19g0900	731	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.3	33	728	-	-
	Ahy19g0900	731	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	111	IPR037045	-
	Ahy19g0900	731	Gene3D	-	325	457	-	-
	Ahy19g0900	731	CDD	PA_subtilisin_like	332	450	-	-
	Ahy19g0900	731	SUPERFAMILY	Subtilisin-like	114	582	IPR036852	GO:0004252\|GO:0006508
	Ahy19g0900	731	Pfam	Fibronectin type-III domain	629	726	IPR041469	-
	Ahy19g0900	731	ProSiteProfiles	Serine proteases, subtilase domain profile.	116	581	-	-
	Ahy19g0900	731	Pfam	Peptidase inhibitor I9	34	111	IPR010259	-
	Ahy19g0900	731	ProSitePatterns	Serine proteases, subtilase family, serine active site.	519	529	IPR023828	-
	Ahy19g0900	731	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	33	728	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g0900	Ahy-Chr19	13880595	13882853	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g0900	13	726	Subtilisin-like Serine Gene Family	AT3G46850	50.822	0.0	711

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g0900	-		-	lang:109341651	773.852