Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0896 ATGGAAAGATACAAAATTTTGAAAGAGCTTGGAGATGGTTCTTGCGGTCATGTATATAAAGCCCATGATACCAGAACTAATGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATGTAAGAGAAGTTAAGGCCCTCCGTAAGATGAATCACCCAAATATCATAAAATTGAGAGAGGTTATAAGCGAGAATAATGAATTGTTTTTCATTTTTGACTACATGGACTGTAATCTTTATCAATTAATAAAAGACAGAGAAAAGCCCTTTTCAGAGGAAGGGATAAGGCGCTTCATGAAGCAAGTGCTACAAGGACTTAGCCACATGCACAAGAGAGGATTCTTTCATCGGGATTTAAAACCTGAGAATTTGCTCGTGACAAATGATGTTATTAAAATTGCTGATTTTGGCTTGGCTAGAGAAGTATCGTCGATGCCTCCTTACACTCAATATGTTTCTACCCGGTGGTACCGAGCTCCTGAAGTTTTGTTACAATCCCCATGTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCAATATTAGCTGAGCTTTTCACTTTGACCCCCATATTTCCGGGTGAAAGTGAGATAGATCAAATGTACAAAATATACCATGTTCTTGGTACCCCAGATTTAGCTGCTTTCCCCATGGGCACAAACAATTCTCTGCTGTTGGAACTTGTAGGTCATGAATTTGTTCCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCTTGGAAGCTATAGATTTTATCTCACAACTCTTATCATGGGACCCATCAAGAAGACCAGATGCAAATCAGTCATTGCAACATCCTTTTTTCCATGTTGATACATGGGTTCCTTCTTCACTTCATGCCCGCGATCCACTTGAGCTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTTGAGCTGAAACTGCAGGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCCTGACATTAGCAGTAAAGCCTAGTGTTCCAAACTTGGACTTGGTTCACAATGTTTCTGAGGGCATGGGAGAGAATATGCTCTTTTGCTCGGATTTTAAAGATCACTCAGACCAGTCAGTATTTTGGACATTGTTATCTCCTGATCAAAATGGAGTTCAGAATTCAGCAGAGACATCATTGTCATTATCATTGTCATACAGCTCCGTGCAGCATTCGCCAATTGGAGTTCCACAATCAACAGGATTTTCCTTCCAGCCTATGCAGCCTAACATCTTAACCACACCATTTTTGGCTTTGTCTTCCCCATTCCAGCGTGGGCACTGCCTTTGA 1320 0.4098 MERYKILKELGDGSCGHVYKAHDTRTNEIVAVKRLKRKFCFWEEYTNVREVKALRKMNHPNIIKLREVISENNELFFIFDYMDCNLYQLIKDREKPFSEEGIRRFMKQVLQGLSHMHKRGFFHRDLKPENLLVTNDVIKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAVGAILAELFTLTPIFPGESEIDQMYKIYHVLGTPDLAAFPMGTNNSLLLELVGHEFVPPMKLSDIIPNASLEAIDFISQLLSWDPSRRPDANQSLQHPFFHVDTWVPSSLHARDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSVPNLDLVHNVSEGMGENMLFCSDFKDHSDQSVFWTLLSPDQNGVQNSAETSLSLSLSYSSVQHSPIGVPQSTGFSFQPMQPNILTTPFLALSSPFQRGHCL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0896 439 Gene3D Transferase(Phosphotransferase) domain 1 83 290 - -
Ahy19g0896 439 CDD STKc_MAK_like 4 284 - -
Ahy19g0896 439 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Ahy19g0896 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Ahy19g0896 439 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0896 439 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0896 439 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0896 439 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 318 - -
Ahy19g0896 439 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Ahy19g0896 439 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0896 Ahy-Chr19 13799002 13808087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0896 1 284 Core Cell Cycle Gene Families AT3G48750 37.075 5.59e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Ahy19g0896 Pkinase 3.70E-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0896 K08829 K08830 gmx:100792842 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0896 19 13799002 13808087 Ahy9g0658 9 9993062 10002130 hybridization