Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0888 ATGGACGAAGATCTCGACTTGCCGACGGCGGAGCCTATGAACGACGACTTCGACTTCGCCGGCGGCGGCGGCGTTGGAATGGACGACGATTTCCCCGTTCTCAAGGTCGGAGAGGAGAAGGAAATTGGCAAGCTTGGATTGAAGAAGAAGCTCCTTAAAGAAGGTGAAGGATGGGAGAATCCTGAAGCCGGTGATGAAGTCCAAGTTCACTATACCGGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGCAGAGATAGGGGAGCCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAGAAGCATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCCACAATTCCGCCCAAAGCAACTCTTCAATTTGATGTTGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGTGGTTTGTTTAAGAAGATACTTGTTGAGGGAGAGAAATGGGAGAACCCTAAGGATCCTGATGAAGTTCTGGTTAATTATGAGGCACGCCTTGAAGATGGAACACTTGTAAAGAAATCTGATGGGGTAGAGTTCACAGTAGAAGACGGTCACTTTTGCCCTGCATTGTCAAAGGCCATCAAAACAATGAAGAAGGGGCAAAAAGTAATTTTGACTGTAAAGCCACAATATGGATTTGGCGAGAAGGGTAAGCCAGCCCATGGTGATGAAGGTGCAGTTCCACCAAATGCAACATTGCTGATTACTCTTGAGTTAGTCTCTTGGAAGACAGTGACCAATGTAACTGATGACAAGAAGGTCATGAAAAAGATCCTTACTGAAGGAGAAGGATATGAGCGTCCCAATGAGGGATCCATTGTGAAATTGAAACTTACTGGTAAGCTGCACGATGGCACTATTTTTGTGAAGAAGGGCCATGATGGTGAAGGGGAACTACTTGAATTCAAAACAGATGAGGAGCAAGTAATTGAGGGGCTTGATAAGGCCATGTTGACGATGAAGAAGGGCGAGGTAGCACTGTTGACTATTGCTCCTGAGTATGCGTTTGGTTCATCAGAATCCAAGCAAGAATTGGCAGTTGTTCCACCTGACTCCACTGTGTATTATGAGGTTGAATTAGTATCTTTTGTGAAGGATAAGGAATCTTGGGACATGGAAACTCCAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCACTGTTTAGAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTATTAAGTTCGTAGAATATGATACCAACTTCAGCATTGAAGAGAAGAAGAGTGCCAAGGACTTGAAGATTGCTTGCAACTTGAATGATGCAGCTTGCAAGTTGAAGTTGAAAGATTATAAACAAGCAGAGAAATTGTGTACAAAGGTTTTGGACCTTGAGAGCACAAATGTGAAAGCACTCTATAGAAGAGCACAAGCATATATCCAGTTAGCTGACTTGGATTTGGCAGAATTTGATATCAAGAAAGCACTTGAGATTGACCCTAATAACAGGGATGTTAAGCTAGAGTACAGGATTTTGAAGGAAAAGATGAAGGAGTACAACAAAAAAGAGGCAAAATTTTATGGAAATATGTTCAGCAAAATGACCAAGTTAGACAAACCTGCCTCCACGGATTCACAACCCATGAGCATTGACAACAAGGCATAA 1728 0.4323 MDEDLDLPTAEPMNDDFDFAGGGGVGMDDDFPVLKVGEEKEIGKLGLKKKLLKEGEGWENPEAGDEVQVHYTGTLLDGTKFDSSRDRGAPFTFTLGQGQVIKGWDEGIRSMKKGENALFTIPPELAYGESGSPPTIPPKATLQFDVELLSWTSVKDICKDGGLFKKILVEGEKWENPKDPDEVLVNYEARLEDGTLVKKSDGVEFTVEDGHFCPALSKAIKTMKKGQKVILTVKPQYGFGEKGKPAHGDEGAVPPNATLLITLELVSWKTVTNVTDDKKVMKKILTEGEGYERPNEGSIVKLKLTGKLHDGTIFVKKGHDGEGELLEFKTDEEQVIEGLDKAMLTMKKGEVALLTIAPEYAFGSSESKQELAVVPPDSTVYYEVELVSFVKDKESWDMETPEKIEAAGKKKEEGNALFRAGKYAKASKRYEKAIKFVEYDTNFSIEEKKSAKDLKIACNLNDAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPNNRDVKLEYRILKEKMKEYNKKEAKFYGNMFSKMTKLDKPASTDSQPMSIDNKA* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0888 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 13 276 - -
Ahy19g0888 575 Gene3D Tetratricopeptide repeat domain 393 550 IPR011990 GO:0005515
Ahy19g0888 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 297 390 IPR001179 GO:0003755
Ahy19g0888 575 ProSiteProfiles TPR repeat profile. 490 523 IPR019734 GO:0005515
Ahy19g0888 575 Gene3D - 156 269 IPR046357 GO:0003755
Ahy19g0888 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 64 152 IPR001179 GO:0003755
Ahy19g0888 575 PANTHER PEPTIDYLPROLYL ISOMERASE 278 389 - -
Ahy19g0888 575 PANTHER PEPTIDYLPROLYL ISOMERASE 390 560 - -
Ahy19g0888 575 PANTHER PEPTIDYLPROLYL ISOMERASE 13 276 - -
Ahy19g0888 575 Gene3D - 39 155 IPR046357 GO:0003755
Ahy19g0888 575 SUPERFAMILY FKBP-like 275 407 - -
Ahy19g0888 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 180 269 IPR001179 GO:0003755
Ahy19g0888 575 SUPERFAMILY TPR-like 397 555 IPR011990 GO:0005515
Ahy19g0888 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 278 389 - -
Ahy19g0888 575 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 390 560 - -
Ahy19g0888 575 SMART tpr_5 490 523 IPR019734 GO:0005515
Ahy19g0888 575 SMART tpr_5 407 440 IPR019734 GO:0005515
Ahy19g0888 575 SMART tpr_5 456 489 IPR019734 GO:0005515
Ahy19g0888 575 SUPERFAMILY FKBP-like 46 157 - -
Ahy19g0888 575 Pfam Tetratricopeptide repeat 490 523 IPR001440 GO:0005515
Ahy19g0888 575 MobiDBLite consensus disorder prediction 1 22 - -
Ahy19g0888 575 Gene3D - 270 392 IPR046357 GO:0003755
Ahy19g0888 575 SUPERFAMILY FKBP-like 156 271 - -
Ahy19g0888 575 Coils Coil 523 543 - -
Ahy19g0888 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 291 387 IPR001179 GO:0003755
Ahy19g0888 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 175 266 IPR001179 GO:0003755
Ahy19g0888 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 59 149 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0888 Ahy-Chr19 13633088 13637808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0888 29 575 Calmodulin-binding Proteins AT5G48570 76.321 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0888 K09571 - gmx:100803189 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0888 19 13633088 13637808 Ahy9g0650 9 9892695 9897492 hybridization