Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0887 ATGGCCAATCTTCATCTTCAGGATAATGGAGATACCTTAACAATTGAGACAAGAAGAGAAATTGCACTGATTCAACATGCATCATATTGTCAAACTTTAAGTTGCACATTTCCAAAGTGTTTGAGGGTGAGGAAACTTATCAGGCATAAGGAAGATTGTATGATTGGTATTGATGAAGGAGATTGTTCGGAATGCATGGAAATTTGGGATTTGCTTAAGCTTCATGCTAAATATTGCAACACACCAGATCCTGAGTGTGAAGTACATTGTTGCAGAGCCATGAAAGCAGAGATTGCGAAGGCGAAGCGACAGAGTAATTTGAACCGAAGAGCGGAAGTAATGGGATTTGTCTTGGAGGCTGTTGTAGCAGCTTCGAATTCAAATGTGCATGACGTGCATCTCAATCTCTCTGCTTTGGAGACCTGCATTAATGAGTATATCATATGA 447 0.4004 MANLHLQDNGDTLTIETRREIALIQHASYCQTLSCTFPKCLRVRKLIRHKEDCMIGIDEGDCSECMEIWDLLKLHAKYCNTPDPECEVHCCRAMKAEIAKAKRQSNLNRRAEVMGFVLEAVVAASNSNVHDVHLNLSALETCINEYII* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0887 148 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 15 117 - -
Ahy19g0887 148 Pfam TAZ zinc finger 19 90 IPR000197 -
Ahy19g0887 148 ProSiteProfiles Zinc finger TAZ-type profile. 8 94 IPR000197 -
Ahy19g0887 148 PANTHER CBP/P300-RELATED 15 117 IPR013178 GO:0004402|GO:0006355|GO:0016573
Ahy19g0887 148 SMART TAZ_2 11 92 IPR000197 -
Ahy19g0887 148 Gene3D TAZ domain 7 124 IPR035898 -
Ahy19g0887 148 SUPERFAMILY TAZ domain 9 95 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0887 Ahy-Chr19 13606158 13630253 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Ahy19g0887 zf-TAZ 5.00E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0887 - K04498 aip:107617072 309.686