Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0882 ATGGAAAACCAATTCTTTCTGAATGGTGGCATGTCCCATCACCAGCACCATCCAATTCATCAGTTTGAAACCGCTTCAATGCAAACAACATGGCGTCATCATTCGTCATCATCATCATCCATGGAAATTCATCAACAAAATAATGTTGCAAATTGCTCACCTGAGAATAATAATCACCAAAATCAAGATTCCTTCTACAACAACAACAACACTGATCATAACAACCTTCAATTTGACTCCTCAGCTTTGAGCTCAATGGTTTCATCTCCATCAACAGCAGCACCGAATTTCAACATGATCCAAAACGACAACAGTTTCGTCATAAGAGAACTCATCGGAAAATTAGGAACAATTGGAGGAAGCTCCGCTGAGATCTCGCCACATTCTCAAACCGTCGCTCTTTACAACAACAATAACACTACTCCTTCTTCGTCGTGTTATAGCACGCCGTTGAACTCTCCTCCGAAGCTCAACATGCCGAAACCGCCGCCACCGTCATCATCAATGGCTCTGAATTCAGCAACCGTCGCTGAATTCTCAGCTGATCCTGGTTTCGCTGAAAGAGCCGCCAAGTTCTCTTGCTTCGGAAGCAGAAGCTTCAATGGAAGAACAACCACAACAACAACAACCACTACTACTTCTCCATTAGTCATGATAAACAATCACAACAACAACAATGGCGCAGAGTTGACTCATCAGAGATCTAATCCAATTCATCGAGTCTCGAGTAGTCCATCGCTGAAATCGCTTGGATCTCAAATGGAGAAGATTTGTTCTTCTCCTTTAGAAATGGCTGCGAATTCTTCTCAAGAGGAATCTACAATTTCAGAGCAGAATCCAAATGTGGAAGGTGCTGCTTTGAAAATCGCTTCTTCTTCTGACATGAGTTCAAGGAAAAGGAAAGGTTCTTCCAGAGCAAAAGCCAAAGACTCTACCAAGGGAGGTGAAGGTAGTGAAGAGTCAAATGCAAAGAGGAGCAAGGGAAATGAAGGTGAAGGAAATGAGAATAATGGGAGAGTGAAGGTAGAAGAAGAATCCAAAGGAGAAGAGAAACAACAACAGAACAACAAGAGTAACAACTCAAAGCCTCCAGAGCCACCAAAGGACTACATTCATGTCAGAGCCAGAAGAGGCCAAGCCACTGACAGCCACAGTCTTGCAGAACGTGTAAGGAGAGAGAAAATTAGTGAGAGAATGAAGCTTCTCCAAGATCTTGTACCAGGCTGCAATAAGGTCACTGGCAAAGCACTTATGCTTGATGAAATCATAAACTATGTTCAGTCATTGCAGCGCCAAGTTGAGTTCCTGTCTATGAAATTGGCTTCTGTTAACACAAGAATGGATCTTAGCATTGAGAACATTGTTCCAAAAGATATATTTCAATCAAATCATTCATTGGCACACCCAATTTTCCCAATAGATTCGTCAGCAACACCCTTTTATGGCCACCAATCCCAGCAAAACCCAGTTATCCACAATAACATTCCTAATGGTTCTTTGCCCCACAATTCAGTGGACCCATTAGATTCTGCTTTGTGCCAAACTCTTGGCATGCAATTACCTCAACTAAATGCCTTTAATGAAATTGGATCTCAGTATCCATTAACTTTCTGTGAGGATGACCTCCACACCATTGTTCAAATGGGATTTGGCCAAACTTCAAACAGGACAACACCAATTCATTCCCCAAGTTTCGACGGTTCAAATCAAGTATCACAAATGAAAGTTGAGCTCTAA 1737 0.4208 MENQFFLNGGMSHHQHHPIHQFETASMQTTWRHHSSSSSSMEIHQQNNVANCSPENNNHQNQDSFYNNNNTDHNNLQFDSSALSSMVSSPSTAAPNFNMIQNDNSFVIRELIGKLGTIGGSSAEISPHSQTVALYNNNNTTPSSSCYSTPLNSPPKLNMPKPPPPSSSMALNSATVAEFSADPGFAERAAKFSCFGSRSFNGRTTTTTTTTTTSPLVMINNHNNNNGAELTHQRSNPIHRVSSSPSLKSLGSQMEKICSSPLEMAANSSQEESTISEQNPNVEGAALKIASSSDMSSRKRKGSSRAKAKDSTKGGEGSEESNAKRSKGNEGEGNENNGRVKVEEESKGEEKQQQNNKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDLSIENIVPKDIFQSNHSLAHPIFPIDSSATPFYGHQSQQNPVIHNNIPNGSLPHNSVDPLDSALCQTLGMQLPQLNAFNEIGSQYPLTFCEDDLHTIVQMGFGQTSNRTTPIHSPSFDGSNQVSQMKVEL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0882 578 MobiDBLite consensus disorder prediction 224 370 - -
Ahy19g0882 578 PANTHER BHLH TRANSCRIPTION FACTOR 2 571 - -
Ahy19g0882 578 MobiDBLite consensus disorder prediction 224 281 - -
Ahy19g0882 578 CDD bHLH_AtBPE_like 369 454 - -
Ahy19g0882 578 Coils Coil 426 446 - -
Ahy19g0882 578 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 377 448 IPR036638 GO:0046983
Ahy19g0882 578 MobiDBLite consensus disorder prediction 294 352 - -
Ahy19g0882 578 Gene3D - 376 451 IPR036638 GO:0046983
Ahy19g0882 578 MobiDBLite consensus disorder prediction 142 170 - -
Ahy19g0882 578 MobiDBLite consensus disorder prediction 554 578 - -
Ahy19g0882 578 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 571 IPR024097 GO:0006355
Ahy19g0882 578 Pfam Helix-loop-helix DNA-binding domain 383 430 IPR011598 GO:0046983
Ahy19g0882 578 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 379 429 IPR011598 GO:0046983
Ahy19g0882 578 SMART finulus 385 435 IPR011598 GO:0046983
Ahy19g0882 578 MobiDBLite consensus disorder prediction 26 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0882 Ahy-Chr19 13533813 13537023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0882 1 532 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 40.370 3.99e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy19g0882 HLH 4.60E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0882 - - gmx:100812081 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0882 19 13533813 13537023 Ahy9g0645 9 9824492 9828036 hybridization