Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0791 ATGGTGGACTGGATCAAGGATTTTCTAGCATCGGGCGATCAACAACTGCCAATAGTTATTTTTCAATTTGCAAGAGTAAAAAATTTACGTACCAATATTGTGCAGAACATTATGTATGGTACTAGACTCTTGATAAATCCAGATATTCCTGAGGCTTTGATGCTTCGAAAAAGAGAGATCTCGCAGTACCTGTCTGTGGTTTCTGGCAAACCAGCATATCTTGATGAAGATGAAGTTTTATATTCCATTGGGAGGAAGACAATAAAGGAGTTACGTGCTGCTGCGGATGTTGGATTCTATGTTGTTCGGGCCACTGTTCTTGATGTTGAACCCGTTCCAAGTTGGTGGTATAAATCATGTGTTTGCAGCGTGAAGGCAGAAGCTAATGCGGATGAATACTTCTGCGATGGCTGTAATAAGAACGTGAATAATGTGGTTGACAGGTATAAGTTGAATTTGTTGGTTTTTGATGGTACTGGTACAACGAACTTTGTTGTGTTCGATAAGGAGGTCGCAGCACTATTCGGACGAACATGTACTGAGATGGTGAAAGAGTTGAATGAAAAAGGGAAAGCAAGCAAAGATCCTACTGGTTTTAATGAGTTTTTCCTTGATAAGGAGTTTCTATTCAAGGTCGAAGTAAAAACTACTGGATGGTGCGATTCTTATGATGTATCGGTGATACGTTCTGATTCTACCAATTTACCGAGGTGGAGGGACACTCAAGGCCCGGTAAAATCTGGTGTACCCAGTGCTGGTCCTATTAACCCTATGCATTCTCGAGGTGAAGATGGATGTTCTGTTTGTGATGAGTCACCTTATCCAATTGTGAAAAATTTGTCTGTTATTAAAAGACCTGTTGTGAGGCGTCTGTTGGATGAGTTCAACATGTCTGGTACTCCTTCCATTAAAAAGTAG 918 0.4074 MVDWIKDFLASGDQQLPIVIFQFARVKNLRTNIVQNIMYGTRLLINPDIPEALMLRKREISQYLSVVSGKPAYLDEDEVLYSIGRKTIKELRAAADVGFYVVRATVLDVEPVPSWWYKSCVCSVKAEANADEYFCDGCNKNVNNVVDRYKLNLLVFDGTGTTNFVVFDKEVAALFGRTCTEMVKELNEKGKASKDPTGFNEFFLDKEFLFKVEVKTTGWCDSYDVSVIRSDSTNLPRWRDTQGPVKSGVPSAGPINPMHSRGEDGCSVCDESPYPIVKNLSVIKRPVVRRLLDEFNMSGTPSIKK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0791 305 Pfam Replication factor-A C terminal domain 99 222 IPR013955 -
Ahy19g0791 305 SUPERFAMILY Nucleic acid-binding proteins 84 225 IPR012340 -
Ahy19g0791 305 CDD RPA1_DBD_C 86 215 IPR013955 -
Ahy19g0791 305 PANTHER REPLICATION FACTOR A 1, RFA1 6 181 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy19g0791 305 Gene3D - 77 236 IPR012340 -
Ahy19g0791 305 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 6 181 - -
Ahy19g0791 305 Gene3D - 3 63 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0791 Ahy-Chr19 11361530 11367827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0791 6 201 Core DNA Replication Machinery Family AT5G61000 23.445 5.96e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0791 - - ahf:112729129 580.096