Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0744 ATGGAGTTGGAAGCTGAACTGGTAACTGCTAACGAAAGTTCTGCTGAAAAAACAGTAGGACCATGTGTGGGCGCTTCAATTTTGGAACCATATATTGGTATGGAATTTGATTCTGAAGCTGATGCCAAGAACTTTTATGATGAATATGCAAGACAGGAAGGGTTTATTGTGCGCATTGATAAATGTCATCGTTCTGAAATTGACAACAGAATTATTTCTCGTCGTCTTACTTGCAATAAGGAAGGTTTTCATGTGAGAGGGAAAAATGATAAAGTCAACCCTTATCGGAAACCACGGGTTAGCATAAGAGAAGGCTGCGAGGCAATGATGATGGTCAAAGTTAATAAATGTGGGAAGTGGGTTGTTACTAAATTTGTAAAAGAACATAGTCATCCACTGATGGGTTCTGGTGTTCGTTCTTATCGTACAACAGAATCGAAGGATAAGAGAATTCGACAACTCACAAAGGAACTCGAGCGTCGAGATCAGCAATGTCAGCAATATCGCAAGCTGATACTTTCCCTTCTGGAAACTGTTGAGGAGCAAAATAAATTCTTATCAACGAAAGTTGAACATGTTGTTCAGTGTGTGAAACAACTTGAGAATGATGTGCAAAAACCTTTGGACACTAGCTAG 636 0.3947 MELEAELVTANESSAEKTVGPCVGASILEPYIGMEFDSEADAKNFYDEYARQEGFIVRIDKCHRSEIDNRIISRRLTCNKEGFHVRGKNDKVNPYRKPRVSIREGCEAMMMVKVNKCGKWVVTKFVKEHSHPLMGSGVRSYRTTESKDKRIRQLTKELERRDQQCQQYRKLILSLLETVEEQNKFLSTKVEHVVQCVKQLENDVQKPLDTS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0744 211 Pfam FAR1 DNA-binding domain 44 134 IPR004330 -
Ahy19g0744 211 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 8 208 - -
Ahy19g0744 211 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 208 - -
Ahy19g0744 211 Coils Coil 151 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0744 Ahy-Chr19 10480155 10483361 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g0744 FAR1 1.50E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0744 - - pvu:PHAVU_010G032600g 258.455