Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0664 ATGGGAAGGGCTCCTTGTTGTGAAAAAGTGGGGTTGAAGAAGGGAAAGTGGACAGAAGAGGAGGATGAACTATTAACAAAGTATATAAAAGCCAATGGTGAAGGTTCATGGAGGTCATTGCCCAAAAATGCAGGATTATTAAGATGTGGTAAGAGTTGCAGACTGAGGTGGGTTAACTATTTGAAAGGTGGCATCAAAAGAGGGAACTTTTCAGCTGAAGAGGAAGACACCATCGTCAACTTGCAAGCTTCTTTTGGCAACAGGTGGGCAACGATAGCAAGCCATTTGCCAGGAAGAACAGACAACGAAATAAAAAATTACTGGAACTCTAACCTCAGCAGGAAACTCTACTGTTTCCCGAGAGTAGCAACTACCATACACACTTCCCTCCCAGGCTTCACCGATGTCCTTCCTCCTAAGCCAAGACCACGTGGCATCAGATCAAGCCGTTCGTCCATCATCATCAAGAATAACACACAAAACCCTAAAGACACCGCACCTCACAAGAACAAACATGAAGACTTTCTTATCCCAGCACCTTCAACTCCTTTCATATATAGTGAGGCTTTGTTCAACACCATGGAGGATTTCATGGTCTTGGACATGGACTTGGATTTCATGAAGTTTAGCACCACGGTGTTGAAAGCAGAAGACGATGGGGAAGAAGAAAAAGTACACTGGACAACAATGTATGAGAAACAAATGATAGATGAACAAGTTGACCATAAGGTTGGAATCTTAAATGAAGAAAGCATCAGTACTAGCAATAATAGTTTGGGTGTGGACCAAACTAGAGAGGGTAGTAGTAATGATAATGTGAATAACAAGATGAGCTCCAATGGGGAAAGTGGAGAGTGCTGGAAAGTGGGAATAAATGAGAATAATCATCACTTGGATATAGAGAGTATTATGGACTTTAATAATGGGTCTGTGAATAGAGAGAACTTGCTGACATGGCTGTGGGAAGATGATTGGGAAAGTGATTGCATTAAATTGGCAGAGATGTTGGGTCCCCATAATCAAATTGATGATATCGTTTCCTGGTTACTCTCATGA 1056 0.4186 MGRAPCCEKVGLKKGKWTEEEDELLTKYIKANGEGSWRSLPKNAGLLRCGKSCRLRWVNYLKGGIKRGNFSAEEEDTIVNLQASFGNRWATIASHLPGRTDNEIKNYWNSNLSRKLYCFPRVATTIHTSLPGFTDVLPPKPRPRGIRSSRSSIIIKNNTQNPKDTAPHKNKHEDFLIPAPSTPFIYSEALFNTMEDFMVLDMDLDFMKFSTTVLKAEDDGEEEKVHWTTMYEKQMIDEQVDHKVGILNEESISTSNNSLGVDQTREGSSNDNVNNKMSSNGESGECWKVGINENNHHLDIESIMDFNNGSVNRENLLTWLWEDDWESDCIKLAEMLGPHNQIDDIVSWLLS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0664 351 CDD SANT 69 112 IPR001005 -
Ahy19g0664 351 Gene3D - 11 67 - -
Ahy19g0664 351 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 327 - -
Ahy19g0664 351 CDD SANT 16 61 IPR001005 -
Ahy19g0664 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy19g0664 351 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy19g0664 351 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy19g0664 351 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy19g0664 351 SMART sant 66 114 IPR001005 -
Ahy19g0664 351 SMART sant 13 63 IPR001005 -
Ahy19g0664 351 Gene3D - 69 116 - -
Ahy19g0664 351 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy19g0664 351 PANTHER MYB TRANSCRIPTION FACTOR 2 327 - -
Ahy19g0664 351 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy19g0664 351 MobiDBLite consensus disorder prediction 254 281 - -
Ahy19g0664 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0664 Ahy-Chr19 9198594 9203493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0664 1 141 MYB Transcription Factor Family AT5G49330 67.376 3.93e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy19g0664 Myb_DNA-binding 1.90E-13 CL0123