Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0663 ATGGGAAGGGCTCCTTGTTGTGAGAAAGTGGGGTTGAAAAAGGGAAGGTGGACAGAAGAAGAGGATGAACTATTAACAAAGTATATTCAAGTCAACGGTGAAGGTTCATGGAGGTCATTGCCCAAAAATGCAGGATTATTAAGGTGTGGAAAGAGTTGCAGATTAAGATGGATTAATTATTTGAAAGCTGGGCTTAAGAGAGGCAACATTTCTTCTGAAGAGGAAGATCTCATTGTCAAGTTGCATACAACTTTTGGCAACAGGTGGTCATTGATAGCGAGTCATTTGCCGGGAAGAACAGACAATGAAATCAAGAACTATTGGAACTCTCACTTGAGTAGGAAAATCTACAGTTTTCGGAGAGCAACTAGCCTAGACACCACCCACATAGGGTCCACCGATACACCCAACAATGTTCCCATTTATCCAAAGCCTAAACCCGGTAGAACAAGCCGTTGGGCCATGAAGAAGAACAAAACCTACATACACAACAATAAGGGTAACAATAATAATAATAATATTAATAACAACCAAAATAATGAAAAAGACGAAATTGCCCTTCGACAACTCAGCCCCGGAGAAAAAGAAGATGATGCGGTTCCAACTCCACCAACTCCTTCGCTTGAGAGTGAGGGTTTTTGCAACACTGTTGAGGATCTCATGGTGTTGGATTTGGACCCTAACAACAATAATAATAATGGGGTGGAAAAAGAAGAAGAAGAAGAAAAAGAAAAAGTTCAGTGCCCTACTACTACGTATGATGAGAAAGAAAACAAGGACACGTTGTTAGGACCATATGATGAACAAGTTGAAGATCTTACTAATAATATTAATAGTAATGGCGGTGGGGCGTTGAGTCTTGATGACATGTTGGACAATTTCATGTTGGAAGAAATTGTATGTGGGGTTCACAACTTAAATGAAGATATTGAAATCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTGAAGAGTGGAATAATTTAGGGTTAGATGAATATTTGGATTGGGAGAGTGTTATGGAGTTCATGAATAATAATAATAATAATAGTGAGTCATCAGAGGGTTGTTATTTGGAGCAGAAAGAAAATTTGCTGACGTGGCTGTGGAAAGATGATGATGATGATTGGGAAAGTGAGTGCATGAAATTGGGGGAGAAGATGGATAGTAGTGAGAAACAAAATGATGATGATGTTGTTGCTTGGTTTCTCTCTTGA 1239 0.3745 MGRAPCCEKVGLKKGRWTEEEDELLTKYIQVNGEGSWRSLPKNAGLLRCGKSCRLRWINYLKAGLKRGNISSEEEDLIVKLHTTFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYSFRRATSLDTTHIGSTDTPNNVPIYPKPKPGRTSRWAMKKNKTYIHNNKGNNNNNNINNNQNNEKDEIALRQLSPGEKEDDAVPTPPTPSLESEGFCNTVEDLMVLDLDPNNNNNNGVEKEEEEEKEKVQCPTTTYDEKENKDTLLGPYDEQVEDLTNNINSNGGGALSLDDMLDNFMLEEIVCGVHNLNEDIEINNNNNNNNNNNNNNNNNSEEWNNLGLDEYLDWESVMEFMNNNNNNSESSEGCYLEQKENLLTWLWKDDDDDWESECMKLGEKMDSSEKQNDDDVVAWFLS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0663 412 Gene3D - 11 67 - -
Ahy19g0663 412 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 357 - -
Ahy19g0663 412 CDD SANT 16 61 IPR001005 -
Ahy19g0663 412 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy19g0663 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy19g0663 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy19g0663 412 MobiDBLite consensus disorder prediction 233 258 - -
Ahy19g0663 412 MobiDBLite consensus disorder prediction 224 258 - -
Ahy19g0663 412 SMART sant 66 114 IPR001005 -
Ahy19g0663 412 SMART sant 13 63 IPR001005 -
Ahy19g0663 412 MobiDBLite consensus disorder prediction 314 334 - -
Ahy19g0663 412 PANTHER MYB TRANSCRIPTION FACTOR 2 357 - -
Ahy19g0663 412 CDD SANT 71 112 IPR001005 -
Ahy19g0663 412 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Ahy19g0663 412 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy19g0663 412 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy19g0663 412 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy19g0663 412 MobiDBLite consensus disorder prediction 128 151 - -
Ahy19g0663 412 Gene3D - 71 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0663 Ahy-Chr19 9133800 9140893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0663 1 162 MYB Transcription Factor Family AT5G49330 67.630 2.21e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy19g0663 Myb_DNA-binding 1.10E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0663 K09422 - gmx:100814275 338.191